CK934288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31 Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 284 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 T GL FG++RV +TP+ E G +G A+ A+ G R IAE+ F D+I FDQ++N+ AKFRY G + +TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +PV FFE K Y + EVPED Y +PL Sbjct: 54 TKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQV-PITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMK-GEVPEDYYTIPL 205
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.646e-31 Identity = 76/191 (39.79%), Postives = 104/191 (54.45%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDI 193
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.646e-31 Identity = 76/191 (39.79%), Postives = 104/191 (54.45%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDI 193
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.377e-30 Identity = 72/190 (37.89%), Postives = 103/190 (54.21%), Query Frame = 2 Query: 179 NLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 N A+ A+ +ALE DP R T GL ++G+ RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + C + VR P G +HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E+P D Y +P+ Sbjct: 8 NNIEALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPI 196
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30 Identity = 72/191 (37.70%), Postives = 102/191 (53.40%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 +N A+N A+ +ALE D R T GL ++G RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + L VR P G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR +E+P D Y +P+ Sbjct: 6 VNNIEALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAP-LVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPI 195
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28 Identity = 68/156 (43.59%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T GL FG RV +TP+ E G G +G A G R I E ++ A DQI+N AAK Y SG Q + R P GA HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S E DD++LP+ Sbjct: 173 KVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPI 327
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28 Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 182 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 LY A+N+ +H +E DP+ + + T GL +++G R+ +TP+ E G AIG A G R I E ++ AF+QI N A Y SG F L VR P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + E +P+ +Y++PL Sbjct: 6 LYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTP-LVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENIPQKEYLVPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28 Identity = 72/156 (46.15%), Postives = 89/156 (57.05%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+PED+Y++PL Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPEDEYLIPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 2 Query: 170 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY 697 +SL + A+N L AL DP+ R T GL FG SRV +TPL E GIVG AIGLA G R + EIQF ++FP FDQI + AK R + + +R P+G GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y Sbjct: 15 QSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSM-PVVIRIPHG--GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY 190
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 70/155 (45.16%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLP 742 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S +VPE +P Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKC-PIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPETIEPIP 190 The following BLAST results are available for this feature:
BLAST of CK934288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934288 ID=CK934288; Name=CK934288; organism=Citrus sinensis; type=EST; length=746bpback to top |