CK934288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 71/156 (45.51%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+P+++Y LPL Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPQEEYFLPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27 Identity = 73/153 (47.71%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 284 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLP 742 T GL + G R+ +TPL E VG AIG AA G R IAE+ F D++ FDQI N+AAKFRY G + + +RA GA HSQ F H+PGLKVV P +P KGLL+ IRD +PV+F E K LY L EVPE Y +P Sbjct: 52 TKGLYAKHG-DRLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAETP-VVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLE-GEVPEGAYAIP 201
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 67/149 (44.97%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE 724 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPD 184
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 67/149 (44.97%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE 724 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPD 184
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 69/155 (44.52%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLP 742 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S +VP+ +P Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF-DVPKTIEPIP 190
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27 Identity = 69/156 (44.23%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T L ++G RV +TP+ E +G AIG A G R I E ++ AF+QI N A RY SG F + +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L +E+P D+Y LPL Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DELPNDEYFLPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27 Identity = 69/196 (35.20%), Postives = 100/196 (51.02%), Query Frame = 2 Query: 170 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPL 745 K + + A+N A+ + DP+ + + T GL +++G RV++TP+ E G G +G A G + + E ++ A D I+N AAK Y S Q N + R P GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY S EE + + LP+ Sbjct: 34 KEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPI 228
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26 Identity = 73/197 (37.06%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 164 SGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLP 742 S K++ + A+N A+ L+ D + + + GL DRFG+ RV +TP+ E G G A+G A G + I E ++ A D +VN AAK Y SG C + R P GA G HSQ ++ +PGLKV++P S A+GLL + IRDPNPVVF E + LY S EE ++ LP Sbjct: 35 STKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQ-MVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLP 230
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26 Identity = 74/213 (34.74%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 119 CANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPL 745 C N + + + ++ + A+NQA+ ++ D R + + + GL + G RV +TP+ E G G A+G A G R I E ++ A DQI+N AAK Y S + + R P GA HSQ A++ H PGLKVV P S AKGLL + IRD NPVVF E + LY S +EV DD+++P+ Sbjct: 6 CGNLFVARLAGTSTRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVP-IVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPI 217
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.303e-25 Identity = 61/140 (43.57%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY 697 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ A D IVN AAK Y SG Q C + R P GA HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRC-PIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILY 176 The following BLAST results are available for this feature:
BLAST of CK934288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934288 ID=CK934288; Name=CK934288; organism=Citrus sinensis; type=EST; length=746bpback to top |