CK934288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24 Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 182 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L+ A+ Q L ++ DPR + T G A+R+G R+ +TP+ E G AIG A G R + E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++ FE LY L E++ E++Y++ L Sbjct: 6 LFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLK-EDLAEEEYLVCL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.343e-24 Identity = 69/191 (36.13%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L +Y A+ +A+ + D R + + T L ++G RV +TP+ E G AIG A G + + E ++ AF+QI N A Y SG ++ L +R P G HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L +E+P+ +Y+LPL Sbjct: 5 LFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-QEIPKQEYVLPL 193
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.343e-24 Identity = 70/221 (31.67%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 92 LSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLP 742 L R L++ACA +Q +++ G ++ + A+N AL ++ D R + + + GL ++G R+++TP+ E I G ++G A G R I E ++ D I+N AAK Y S +F+ + R GA HSQ A+F H PG+KVV+P A+GLL + +RD NPV+ E + LY + PE D++LP Sbjct: 9 LLRNGLTSACALEQSVRRLASGT---LNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVP-IVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLP 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24 Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 191 AINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPL 745 AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P S AKGL+ S IRD NPVV E + +Y + E E D+++P+ Sbjct: 38 AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPI 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.675e-24 Identity = 73/228 (32.02%), Postives = 109/228 (47.81%), Query Frame = 2 Query: 71 LRRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLP 742 L++F G + + S + + +++ K + + A+N A+ ++ D R + + + GL D+FG RV +TP+ E G G A G A G R I E ++ A D IVN AA+ Y SG C + R P G HSQ ++ +PGLKVV P S A+GLL + IRDPNPVV E + LY + +E +D++LP Sbjct: 4 LQKF-GEIVGTSRSWKLLSSTIAKRYSSSSNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQAC-PIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLP 229
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 9.675e-24 Identity = 78/229 (34.06%), Postives = 107/229 (46.72%), Query Frame = 2 Query: 71 LRRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPL 745 LR G L RR TA A Q+ + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y + E PE D+++P+ Sbjct: 12 LREVSGLLKRRFHWTAPAALQV--------------TVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPI 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.264e-23 Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 182 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L+ A+ + L ++ DP+ + T G A+++G R+ +TP+ E G AIG A G R + E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P AKGL+ S IR NPV+ FE LY L E +P+++Y++ L Sbjct: 6 LFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK-ETIPDNEYLVCL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.264e-23 Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 2 Query: 191 AINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPL 745 AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y + E PE D+++P+ Sbjct: 38 AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPI 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.155e-23 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPL 745 L + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPI 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.155e-23 Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 2 Query: 170 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ-FNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPL 745 K + + AIN AL L D + + + T GL D++G R+ +TP+ E G G +G A G R I E ++ A D I+N +AK Y SG + FN + R P G G HSQ A++ VPGLKVV P S +GLL S IRD NPVV+ E + LY ++ + +Y++P+ Sbjct: 27 KEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFN--PIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPI 221 The following BLAST results are available for this feature:
BLAST of CK934288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934288 ID=CK934288; Name=CK934288; organism=Citrus sinensis; type=EST; length=746bpback to top |