CK934288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 2 Query: 176 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPL 745 L + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPI 225
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23 Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 2 Query: 182 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L+ A+ AL ++ DP + T G +++G R+ +TP+ E G AIG A G R I E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P KGLL S IR+ NPV+FFE LY L+ E + E +Y+L L Sbjct: 6 LFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYNLN-ENLIEQEYLLCL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.801e-23 Identity = 64/198 (32.32%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 164 SGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPL 745 S K + + A+N AL + + D + + + T GL +++G RV +TP+ E G G +G A G + + E ++ A D I+N AAK Y S Q + + R G G HS +++ PGLKV++P S A+GLL + IRDP+PVVF E + LY S EV + + LP+ Sbjct: 22 SAKQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISV-PIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPI 218
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.190e-23 Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T GL FG RV +TP+ E G G +G A G R + E ++ A D I+N AAK Y SG Q C + R P GA G H+Q+ ++ VPGL V+ P AKGLL + IR +PVVF E + LY + + DD++LP+ Sbjct: 174 KVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRC-PIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFVLPI 328
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.190e-23 Identity = 69/189 (36.51%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 182 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L+ A+ +A+ +E + R + T GL ++GK RV +TP+ E VG A+G AA G + E +I A+ QI N SG F + +R P G G HSQ E++F VPGL++V +P AKGLL S IR NP++F E LY L EVP++DY+LPL Sbjct: 6 LFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVP-MVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLK-GEVPDNDYLLPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 68/189 (35.98%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 182 LYSAINQALHIAL-ETDPRAYXXXXXXXXXXXXRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 L+ A+N A+ + D A + T L ++G+ RV +TP+ E VG AIG A G + E +I AF QI N SG ++ + +R P G G HSQ E +F VPGL++V +P AKGLL S IR NP+ F E LY L EVP++DY+LPL Sbjct: 6 LFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAENSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIP-IVLRGPGGVGKQLGAEHSQRLECYFQSVPGLQIVACSTPYNAKGLLKSAIRSKNPIFFLEHVLLYNLKA-EVPDNDYVLPL 192
BLAST of CK934288 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.074e-18 Identity = 57/156 (36.54%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 278 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL 745 + T L ++G RV + P+ E G AIG A G R I E ++ AF+QI N + +Y SG FN + +R P G HSQ E+ F +PGL++V + AKGLL S I + P++F E LY L VP+++Y LPL Sbjct: 39 KVTKDLHVKYGDLRVLDAPIAENSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNI-PVVIRGPGGIGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLK-GFVPDEEYYLPL 192 The following BLAST results are available for this feature:
BLAST of CK934288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934288 ID=CK934288; Name=CK934288; organism=Citrus sinensis; type=EST; length=746bpback to top |