CK934291

Overview
NameCK934291
Unique NameCK934291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1671 contig Csv1_Contig1671:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLA_HUMAN (Protein-tyrosine phosphatase-like member A OS=Homo sapiens GN=PTPLA PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.467e-37
Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 791
            L +L   +LT Y+  + AGW  +    ++   E G H  +YK++++ L+  QT A+LEI+H L+G+V + +  T  Q+SSR+++ W I  S    QN             TEI RYSF+     L   P ++ W RY+ F++LYP G+  E+  IY ALP++K++  + +R+PNK+N SFDY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   68 LGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFS-LLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PHS1_YEAST (Protein PHS1 OS=Saccharomyces cerevisiae GN=PHS1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 72/223 (32.29%), Postives = 107/223 (47.98%), Query Frame = 3
Query:  138 TKQMAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQ--NHXXXXXXXXXXXXTEIIRY-SFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGF--YVPGSPHMYTYMLGQRKKAL 791
            +K++A  LS     +L  YN     GW+ +LYL +    + G    +   +    L Q  A++EI++  LG+VRSP+  T+ Q+SSRL V  GI    P T                 TEI+RY  +F M      AP  L+ LRY+ F +LYP+G+ SE+ +IY AL              N     +   Y  IL+     Y+PG P ++ +M+ QRKK +
Sbjct:    2 SKKLASPLS-----FLPLYNLLSAVGWSYLLYLVISLYPKVGQPAFFYQTKNVATLVQCGAIIEIINSFLGVVRSPLLTTVAQVSSRLLVVLGIFQLLPNTSGVQSVVYISLLLAWSITEIVRYLYYFFMLVFKNGAPKILILLRYNLFWILYPTGVASELRIIYCAL--------------NAAESQYSLLYKRILIAAMLAYIPGFPMLFLHMVAQRKKVM 205          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_CHICK (Protein tyrosine phosphatase-like protein PTPLAD1 OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18
Identity = 59/222 (26.58%), Postives = 107/222 (48.20%), Query Frame = 3
Query:  168 LRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDY-----FYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 809
            L++ YL  YN   F G++ +   + + L  L +    + +  +   +   QT A++EIL+ L+GLVRSP+   + Q+  R ++ + +L S  + Q+              E+ RY ++ M   +G     L WLRY++++ LYP G  +E   +  ++P   E+  + L +PN  N +  +      Y   L LG +V      + Y+  QRK+ L   K++
Sbjct:  145 LKKGYLIMYNLVQFLGFSWIFVNMTVRLFILGKDSFYDTFHTIADMMYFCQTLALMEILNSLIGLVRSPLIPAVIQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYPYY-MLSCMGIEWKPLTWLRYTSWIPLYPLGGLAEAVCLIQSIPIFSETGKFSLGLPNPLNVTIQFSFLLQMYLIALFLGLFV-----NFRYLYKQRKQHLGPKKRK 360          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: YNQF_SCHPO (Uncharacterized protein C19C2.15c OS=Schizosaccharomyces pombe GN=SPBC19C2.15c PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 3
Query:  273 VYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQT-QNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKK 785
            V+      ++  QT A+ E+ H + GLV S    T+ Q++SRLY+ WG+ + F    +              TEIIRY+F+      G  P++L WLRY+TFL+LYP G  SE  L+  +            R+  ++ +S +     IL +  Y PG   MYT+ML QR+K
Sbjct:   41 VFHETNTLVRWVQTLAIAEVFHSIFGLVSSSPLTTIIQVASRLYLVWGVCYPFSYVIEGSPIYLSMIIAWSITEIIRYAFYAF-NLNGDIPAFLTWLRYNTFLILYPIGAGSEFLLVLKS------------RIAAQYVWSLNKLLWPIL-MSIYPPGLYIMYTHMLAQRRK 198          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_BOVIN (Protein tyrosine phosphatase-like protein PTPLAD1 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 56/225 (24.89%), Postives = 102/225 (45.33%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKWNFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 809
            L+ L++ YL  YN   F G++ +   + +    L +    + +  V   +   Q  A +E ++  +G+ +SP+  +L Q+  R ++ + I  +  + QN              EI RY F+ M   +      L WLRY+ ++ LYP G  +E   +  ++P   E+   ++ L  P K    F +F   Y  +L LG YV      + Y+  QR++   + KK+
Sbjct:  142 LTSLKKGYLFMYNLVQFLGFSWIFVNMTVRFFILGKESFYDTFHTVADMMYFCQMLAAVESINAAIGVTKSPVVPSLFQLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVEIFRYPFY-MLSCIDMDWKVLTWLRYTVWIPLYPMGCLAEAVSVIQSIPVFNETGRFSFTLPYPVKIKVRFSFFLQIYLILLFLGLYV-----NFRYLYKQRRRRFGQKKKK 360          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_PONAB (Protein tyrosine phosphatase-like protein PTPLAD1 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14
Identity = 57/225 (25.33%), Postives = 103/225 (45.78%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKWNFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 809
            L+ LR+ YL  YN   F G++ +   L +    L +    + +  V   +   Q  AV+E ++  +G+  SP+  +L Q+  R ++ + I  +  + QN              EI RYSF+ M   +      L WLRY+ ++ LYP G  +E   +  ++P   E+   ++ L  P K    F +F   Y  ++ LG Y+      + ++  QR++   + KK+
Sbjct:  144 LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFY-MLTCIDMDWEVLTWLRYTLWIPLYPLGCLAEAVSVVQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYI-----NFRHLYKQRRRRYGQKKKK 362          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_HUMAN (Protein tyrosine phosphatase-like protein PTPLAD1 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14
Identity = 57/225 (25.33%), Postives = 103/225 (45.78%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKWNFSFDYF---YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 809
            L+ LR+ YL  YN   F G++ +   L +    L +    + +  V   +   Q  AV+E ++  +G+  SP+  +L Q+  R ++ + I  +  + QN              EI RYSF+ M   +      L WLRY+ ++ LYP G  +E   +  ++P   E+   ++ L  P K    F +F   Y  ++ LG Y+      + ++  QR++   + KK+
Sbjct:  142 LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFY-MLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYI-----NFRHLYKQRRRRYGQKKKK 360          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_MOUSE (Protein tyrosine phosphatase-like protein PTPLAD1 OS=Mus musculus GN=Ptplad1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12
Identity = 58/222 (26.13%), Postives = 97/222 (43.69%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESE--TYCLRMPNKWNFSFDYF---YAAILVLGFYVPGSPHMYTY---MLGQRKKAL 791
            L+ L++ YL  YN     G++ +   L +    L +    + +  V   +   Q  A++E L+  +G+  +P+   L Q   R ++ + +  +  + QN              EI RY F+ M   +      L WLRY+ ++ LYP G  SE   +  ++P   ES   ++ L  P K    F +F   Y  +L LG Y+    H+Y       GQ+KK L
Sbjct:  142 LTNLKKGYLFMYNLVQLLGFSWIFVNLTVRFFILGKESFYDTFHNVADMMYFCQMLALVETLNAAIGVTSTPVLPALIQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFY-MLSCIDMDWKVLTWLRYTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFSFTLPYPVKMKVRFSFFLQVYLVMLFLGLYI-NFRHLYKQRRRRYGQKKKKL 361          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD1_DANRE (Protein tyrosine phosphatase-like protein ptplad1 OS=Danio rerio GN=ptplad1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 48/219 (21.92%), Postives = 95/219 (43.38%), Query Frame = 3
Query:  168 LRRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE*N 815
            L++ +L  YN   F G++ +   + + L  L +    + +  +   +   Q  A++E+++  +GLV++ +     Q+  R ++ + I  S    QN              EI RY F+ M   +      L WLRY+ ++ LYP G+ +E   +  ++P   E++   + +P     S  + Y   L L     G    + ++  QR +     K++ N
Sbjct:  142 LKKGFLFMYNLVQFLGYSWIFVNMTVRLFILGQDSFYDTFHTIADVMYFCQMLAIMEVINPAVGLVKTGVMPAFIQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFY-MLACIDTEWKLLTWLRYTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLSIPLPKATGLSLSFSYILQLYLVVMFLGLFINFRHLFKQRTRRFRTKKRKAN 359          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTAD2_BOVIN (Protein tyrosine phosphatase-like protein PTPLAD2 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11
Identity = 46/213 (21.60%), Postives = 98/213 (46.01%), Query Frame = 3
Query:  171 RRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDY---FYAAILVLGFYVPGSPHMYTYMLGQRKKAL 791
            +  YL  Y    F G + +   + +   +  +    + + A+   +QL Q+ ++LE+LH  +G+  + +   + Q++ R+ V + ++ S  + Q               +++RY++  M   +G + + L W   + ++ +YP  + +E   IY +LPY +   TY  ++P   +F F Y    Y  +L +G Y       Y ++  +R+  L
Sbjct:   16 KNAYLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMQLCQSISLLELLHIYVGIESNHLLPRILQLTERIIVLFMVITSQEEVQEKYVVCVLFIFRNLLDMVRYTY-SMLSVIGISYAVLTWFSQTLWMPIYPLCVLAEAFTIYQSLPYFESFGTYSTKLPFDLSFYFPYVLKIYLMMLFVGMY-----FTYNHLYSERRDIL 222          
The following BLAST results are available for this feature:
BLAST of CK934291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PTPLA_HUMAN2.467e-3736.79Protein-tyrosine phosphatase-like member A OS=Homo... [more]
PHS1_YEAST4.516e-2332.29Protein PHS1 OS=Saccharomyces cerevisiae GN=PHS1 P... [more]
PTAD1_CHICK4.374e-1826.58Protein tyrosine phosphatase-like protein PTPLAD1 ... [more]
YNQF_SCHPO7.461e-1833.72Uncharacterized protein C19C2.15c OS=Schizosacchar... [more]
PTAD1_BOVIN2.934e-1424.89Protein tyrosine phosphatase-like protein PTPLAD1 ... [more]
PTAD1_PONAB6.536e-1425.33Protein tyrosine phosphatase-like protein PTPLAD1 ... [more]
PTAD1_HUMAN6.536e-1425.33Protein tyrosine phosphatase-like protein PTPLAD1 ... [more]
PTAD1_MOUSE1.233e-1226.13Protein tyrosine phosphatase-like protein PTPLAD1 ... [more]
PTAD1_DANRE2.103e-1221.92Protein tyrosine phosphatase-like protein ptplad1 ... [more]
PTAD2_BOVIN2.325e-1121.60Protein tyrosine phosphatase-like protein PTPLAD2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934291 ID=CK934291; Name=CK934291; organism=Citrus sinensis; type=EST; length=850bp
GGGGGAAAGTGGTTGAGCAGCTTACCTGTCTCTTCTCACTTCGCACCCAT
CCCCATCTCCCTTAATTGCTGTCGTTTTAAATGGTCTAAATTTTCTCTTT
TAATTGCTTCCCAGTTTACAATCTTTCAATTTTCAATACAAAACAGATGG
CGGGTTGTTTGTCGCTTCTCAGACGCCTGTACCTCACTGCCTACAACTGG
ACCGTCTTTGCCGGATGGGCCCAGGTTTTGTACCTTGCTTTGAAGACCTT
AAACGAGTCCGGCCACGAAAATGTCTACAAAGCCGTCGAAAGGCCTCTCC
AGCTCGCCCAAACCGCCGCCGTTTTGGAGATTCTTCATGGTCTTCTAGGC
TTGGTGAGATCTCCAATAACAGCTACACTGCCACAAATTAGCTCTAGATT
GTATGTTACATGGGGCATTTTATGGAGTTTTCCTCAGACTCAGAATCATA
TACTTGTTAGTTCATTGGTGATCAGCTGGTCCTTAACTGAGATTATTCGC
TACTCTTTCTTTGGCATGAAGGAGGCACTTGGTTTTGCACCTTCATGGCT
CTTGTGGCTGAGGTATAGCACATTTTTGCTGTTGTATCCATCTGGCATTA
CGAGTGAAGTTGGTCTTATTTACACTGCCCTTCCATACATAAAAGAATCC
GAGACGTATTGTCTTAGAATGCCAAACAAATGGAATTTCTCTTTTGACTA
CTTCTACGCTGCAATTCTTGTGCTTGGATTCTATGTGCCAGGTAGTCCTC
ATATGTATACATATATGCTTGGGCAGAGGAAGAAAGCCCTTTCGAAATCG
AAAAAAGAGTAAAATGGTTTTTTAACTGCAATGNNNNNNAGTGTATCCTA
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