CK934293

Overview
NameCK934293
Unique NameCK934293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:703..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.241e-13
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.241e-13
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.117e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query:    9 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.610e-13
Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  475 PGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 3.610e-13
Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  475 PGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
The following BLAST results are available for this feature:
BLAST of CK934293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_MAIZE1.241e-1394.59Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_HORVU1.241e-1394.59Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_WHEAT2.117e-13100.00Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_PHAVU3.610e-1389.19Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH3.610e-1389.19Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_H05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934293 ID=CK934293; Name=CK934293; organism=Citrus sinensis; type=EST; length=412bp
GGGCTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATG
CTTGAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACAT
GATTTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACC
GGTATTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATT
ACTGATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTCCT
GTATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCAT
TGCCTTTGTAGCTCATTTCGGAGCATGCAATCTCTTGTATTGCAAGTAGA
TAATATATGGAAGTTCATAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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