CK934295

Overview
NameCK934295
Unique NameCK934295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:10..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29
Identity = 82/244 (33.61%), Postives = 123/244 (50.41%), Query Frame = 3
Query:  138 KAAGAGSLLLVCLVVFGIIGVCQGGE--------LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC 839
            K+  A S    C +V  ++  C  G+        L  ++Y  +C   E+IVRS        +P  PA L+R+ FHDC V+GCDAS+L+      +  E D+  N  +   +++  IK+ LE  CP  VSC+D++ LA RD+V+       L  V  GR+D  S      AD  LP   A+       F +KG+T+++ V + G HTIGV+HC   +N L  F        ++DPR+  FL+  C
Sbjct:    4 KSKVAESTAASCFLVMSLLCSCIIGDQMETNNEGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVA--LTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC---NNVLSRFDNANATSENMDPRFQTFLRVAC 242          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.395e-29
Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 3
Query:  144 AGAGSLLLVCLVVFGIIGVCQGGELRK---------NFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESRCPG-IVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTI 728
            A A ++  V L+          G  R+         +FY+ SC  AE IVRS        +  L A L+R+HFHDCFV+GCDASVL++ +A    E+ A PNL+L    F+ IN+I   L   C G +VSC+D++ALA RDSV         ++V  GRRD S S A + D+L  LP P A    L    +   L   DLV LSGGHTI
Sbjct:    8 AAAAAVAAVVLICSSSTATAADGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSV--VVSGGPSYKVPLGRRD-SASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.570e-28
Identity = 74/208 (35.58%), Postives = 106/208 (50.96%), Query Frame = 3
Query:  216 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC 839
            L  NFY+D+C  AEDIVR         + +     +R  FHDC V  CDAS+L++ST     E++   +  L  F  I EIK  LE  CPG+VSC+DI+ L+ R+ +  +        + TGRRDG  S     +  LP    + S + + F   G+    LV L G H++G +HC    +RLY      + DPSL+P +   +  KC
Sbjct:   31 LMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGI--EAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPSLNPDHVPHMLHKC 231          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 3
Query:  312 AKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC 743
            A LIR+HFHDCFV GCD  +L+N TA    E+ A  N  S+ GF VI++ K   +++C    VSCAD++A+A RD+  F+      + +  GR+D   +    A+  LP+PF N S     F DKG   +++VVL+G HT+G S C
Sbjct:   92 ASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDA--FRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  216 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 746
            LR+    ++C  +   VR +      +   + A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  +   CP I VSCADI+A+A RDSV+    +   + V  GR D   +    A   LP+PF N +   + FNDK  T++++V L+G HT+G + C+
Sbjct:   71 LRQQLTPEACVFSA--VRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQT--YNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCS 246          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24
Identity = 65/180 (36.11%), Postives = 104/180 (57.78%), Query Frame = 3
Query:  216 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 746
            LR+    ++C  +   VR++      +   + A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  + + CP + VSCADI+A+A RDSV+    +   + V  GR D   +  + A   LP+PF N +   + F+DK  T++++V L+G HT+G + C+
Sbjct:   72 LRQQLTPEACVFSA--VRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQT--YSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCS 247          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 3
Query:  312 AKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 746
            A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S+ GFEVI + K  +   CP I VSCADI+A+A RDS++    +   + V  GR D + +  + A   LP+P  N +   + F+DK  TV+++V L+G HT+G + C+
Sbjct:  101 ASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQT--YTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCS 246          
BLAST of CK934295 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 3
Query:  312 AKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAV-PNLSLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC 743
            A LIR+ FHDCFV GCDA +L+N TA    E+ A   N S+ GF VI + K  ++++ P + VSCADI+++A RD  SF+      + V  GR+D   +    A+  L  P  N +     F  KG    ++V L G HTIG + C
Sbjct:   91 ASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARD--SFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARC 234          
The following BLAST results are available for this feature:
BLAST of CK934295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER29_ARATH1.110e-2933.61Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER1_SORBI9.395e-2940.67Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER42_ARATH3.570e-2835.58Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PERN_IPOBA3.694e-2541.78Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PERX_SOLTU3.127e-2437.22Suberization-associated anionic peroxidase OS=Sola... [more]
PER1_SOLLC9.099e-2436.11Suberization-associated anionic peroxidase 1 OS=So... [more]
PER2_SOLLC4.516e-2341.22Suberization-associated anionic peroxidase 2 OS=So... [more]
PERA_IPOBA1.041e-1939.73Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_H09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934295 ID=CK934295; Name=CK934295; organism=Citrus sinensis; type=EST; length=849bp
GGGGAATGAAACCCAACTGCCACTTGCCTCTTTCTCTGGCTGCAAGTGTA
TAAAAACATAGTGAGAGGTAGCTAGAGATGAGTAAGCTTGCAGCGTTAAA
CTCATTTCTCTTAGTAACTAGTGAATTAAAGATGAAGAAAGCCGCTGGGG
CTGGGTCTCTTTTGTTAGTTTGCTTAGTAGTTTTTGGTATTATAGGGGTT
TGCCAAGGAGGTGAGCTAAGGAAGAATTTCTACAGGGACAGCTGTAAATC
TGCTGAAGATATCGTCAGGAGCATCACCTGGAAAAATGCCGCCAGTAACC
CTGACTTGCCGGCCAAGCTTATCAGAATGCATTTCCATGACTGCTTTGTT
AGGGGTTGCGATGCGTCGGTTTTGATAAACTCAACTGCAGGTAACAAAGC
AGAGAGGGATGCAGTTCCGAATCTATCTTTGGGAGGTTTCGAAGTTATTA
ATGAGATTAAATCGGAGCTCGAGAGCAGGTGTCCAGGAATTGTTTCTTGT
GCCGATATCGTAGCATTGGCTACAAGGGATTCTGTTTCATTCCAATTTCA
AAAACCGGACCTGTGGGAAGTGCTCACCGGTAGAAGAGATGGCAGTGTGT
CCATAGCTGCTGAGGCCGATCTGCTGCTTCCTTCACCTTTTGCCAACTTC
AGTGAACTCAAGAAAAATTTTAACGACAAAGGTCTCACTGTCAAAGATCT
TGTAGTCCTTTCAGGTGGCCACACAATCGGAGTTTCGCACTGCACCTTCT
TCAGCAACAGGCTCTACAATTTCACAGGAAATGGAGATCAAGATCCTTCA
TTGGACCCACGATACGCTGCATTCTTAAAAACCAAATGCAAGAGCCTTG
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