CK934313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CL1_ORYSJ (Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa subsp. japonica GN=4CL1 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.243e-21 Identity = 68/222 (30.63%), Postives = 114/222 (51.35%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTAL--TEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDE-FWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 668 GYG+TE G ++ C A K + + G T + E+ ++DP +G S R+ GEI +RG IM GYL +P T+ + +GW +TGD+G + D + I DR K++I P++ +AAVV + E GE P AFV+ EGS+ +E ++ ++ ++ +Y + V F+D++PK +GKI + LR+ +++ Sbjct: 352 GYGMTEAGPVLSMCL---------AFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRN--LPGEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVAKTEGSEL--SEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKILRKELRKQLQHL 560
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.848e-21 Identity = 71/215 (33.02%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTAL--TEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 650 GYG+TE G ++ C PA K A+ G T + E+ V+DP +G S R+ GEI +RG IM GYL DP T + +GW +TGD+G + D + I DR K++I P++ +AAVV + D+ GE P AFV + S TE+ + E+ ++ Y V F+ +PK+++GKI + LR Sbjct: 362 GYGMTEAGPVLSMC---------PAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRN--LPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFV--VRAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELR 563
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_LISIN (2-succinylbenzoate--CoA ligase OS=Listeria innocua GN=menE PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21 Identity = 68/217 (31.34%), Postives = 101/217 (46.54%), Query Frame = 3 Query: 15 YGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 665 +G+TET +V+ K N + ++ KA A EV + D GEI+L+G I GYL + T K D GWF TGD+G + +G+L + +R D+II AV E AVV + D WG P AF+ + EG E + + C+ L + +PK + ++ LPKT++GKIQ+ L+E N Sbjct: 279 FGMTETASQIVTLPPKDALNKIGSSGKALFPA----------EVKIADD-------------GEILLKGPSITPGYLHNEKATAKAFID-GWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVIGAYEAVEEVAVVGKSDAKWGSVPVAFIVVNEGF----DEGVLKDICQTNLASFKIPKQITIVEHLPKTASGKIQRNKLKERHSN 467
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20 Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GE+ +RG +MLGY + P T + + + GW +TGD+ VM +G+L I DR KD+I+ P V E A V P GE FV K+ S TE+ ++ +CR +L Y VPK V F DELPK++ GKI + LR+ A Sbjct: 405 GELCVRGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL---TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEA 553
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20 Identity = 66/216 (30.56%), Postives = 111/216 (51.39%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GYGLTE+ I S +AE+++ G+ + TE ++DP SG + + + GE+ +RG +M GY K+ T+ +T DGW TGD+ + DGYL + DR K++I P V + AV+ PD G+ P A++ K+GS +E+E++E+ ++ Y + V F+ ++PK ++GKI + L ++A Sbjct: 347 GYGLTESTAIGAST---------DSAEESRRYGTAGLLSPN-TEAKIVDPDSGEALPVNRT--GELWIRGPYVMKGYFKNAEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAVIPFPDREVGQFPMAYIVRKKGSNL--SEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDLIKLA 548
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_LISMF (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=menE PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 66/213 (30.99%), Postives = 99/213 (46.48%), Query Frame = 3 Query: 15 YGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 653 +G+TET +V+ K N + ++ KA A EV + D GEI+L+G I GYL + T D GWF TGD+G + +G+L + +R D+II V E AV+ +PD+ WG P AF+ +E E E+ C L Y +PK + +++LPKT++GKIQ+ L+E Sbjct: 279 FGMTETASQIVTLPPKDALNKIGSSGKALFPA----------EVKIADD-------------GEILLKGPSITPGYLHNKKATEASFVD-GWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVISEYEGVKEVAVIGKPDDKWGSVPVAFIVAEETFD----EAELRLICETNLAGYKIPKQITIVEKLPKTASGKIQRNKLKE 463
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 67/216 (31.02%), Postives = 102/216 (47.22%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTAL-TEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 656 GYGL+E + + R R + T+ L E V+DP + + +GE++++G +M GY K P+ T + D GW YTGD+ DGY I DR KD+II P V EA V+ PD GE +V K +S TE++++++C L Y P + F+D++PK +TGK+ + LR+I Sbjct: 314 GYGLSEASPVTCFNPFDRG------------RKPGSIGTSILHVENKVVDP---LGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALKD-GWLYTGDLARRDEDGYFYIVDRKKDMIIVGGYNVYPREVEEVLYSHPDVKEAVVIGVPDPQSGEAVKGYVVPK---RSGVTEEDIMQHCEKHLAKYKRPAAITFLDDIPKNATGKMLRRALRDI 510
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20 Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 141 EVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 653 EV +DP +G S ++ T GE+ +R C+M GY + T K + + GW +TGD+G + DG + I DR K++I P+V + AVV PDE GE P A V + K+ E++++ + + HY + V F+D +PK+ +GKI + +LR+ Sbjct: 368 EVKFIDPDTGRSLPKN--TSGELCVRSQCVMQGYFMNKEETDKTIDEQGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPAACVVI--NPKATEKEEDILNFVAANVAHYKKVRAVHFVDSIPKSLSGKIMRRLLRD 534
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GE+ ++G +MLGY + P T + + + GW +TGD+ VM +G+L I DR KD+I+ P V E A V P GE FV K+ S TE+ ++ +CR +L Y VPK V F DELPK++ GKI + LR+ A Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL---TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEA 553
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GE+ ++G +MLGY + P T + + + GW +TGD+ VM +G+L I DR KD+I+ P V E A V P GE FV K+ S TE+ ++ +CR +L Y VPK V F DELPK++ GKI + LR+ A Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL---TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEA 553 The following BLAST results are available for this feature:
BLAST of CK934313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934313 ID=CK934313; Name=CK934313; organism=Citrus sinensis; type=EST; length=818bpback to top |