CK934313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 59/157 (37.58%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 671 GE+ +RG +MLGY + P T + D GW TGD+ M DG+L I DR KD+I+ V E+AV+ P+E GE FV + S T +E++ +CR L Y VPK V F DELPK++ GKI + LR+ +G Sbjct: 405 GELWVRGPQVMLGYWQRPDATDDVLKD-GWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKNDASL---TPEELLTHCRRYLTGYKVPKIVEFRDELPKSNVGKILRRELRDEEVKVG 557
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 65/215 (30.23%), Postives = 102/215 (47.44%), Query Frame = 3 Query: 9 HGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 653 H +G+TE + + L EK LR QG + E+ +++ + G+ DG + G ++ RG ++ Y G+ DGWF TGDV + SDG++ I DR+KD+I P + +AAV+A E W E P +++K S+ T E+ Y K+ + +P +F++ELP+ TGKI K LRE Sbjct: 324 HAWGMTELSPFGTANTPLAHHVDLSPDEKLSLRKSQGRPPYGV-ELKIVNDE-GIRLPEDGRSKGNLMARGHWVIKDYFHSDPGST---LSDGWFSTGDVATIDSDGFMTICDRAKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERP-LLIAVK-SPNSELTSGEVCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRLRE 531
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVL 647 GEI ++G +M GYLK+ + +DGWF TGD+G DG+L + DR D+II P V EA V D+ WG+ P A++ + S E+E+ E+C+ +L Y VPK F+D LP+ ++ K+ + L Sbjct: 335 GEITVKGPTVMKGYLKNEAANKDSF-NDGWFKTGDIGYFDDDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPNVAEAGVKGVDDKTWGKVPHAYLV----ADSPVDEEELSEFCKERLASYKVPKAFHFVDRLPRNASNKLMRHKL 478
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 650 GYG+TE G ++ +L A E +++ E+ ++DP +G S R+ GEI +RG IM GYL +P T + + DGW +TGD+G++ D L I DR K++I P + + AVVA +E GE P AFV + S+ +E ++ ++ ++ Y V F + +PK +GKI + LR Sbjct: 353 GYGMTEAGPVLAM-------SLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQP--GEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFV--VKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLR 554
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 68/216 (31.48%), Postives = 102/216 (47.22%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGK-LPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 656 GYGLTET + + P + + + V + +D LD K + R G EI ++G +MLGY +P TR+ + ++GW +TGD+G D + I DR K +I P + +A V PD GE P A V +++G TEKE+++Y + + H + V F+DE+PK TGKI V+REI Sbjct: 341 GYGLTETTSAFI---------ITPEGDDKPGASGKVVPLFKVKVID-LDTKKTLGVNRRG----EICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTM--TEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREI 540
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GE+ ++G +MLGY + P T + + D GW +TGD+ VM DG+L I DR KD+I+ V E A V P GE FV K+ + T+ +I +CR L Y VPK V F +ELPK++ GKI + LR+ A Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKD-GWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDPAL---TDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEA 553
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GE+ ++G +MLGY + P T + + D GW +TGD+ VM DG+L I DR KD+I+ V E A V P GE FV K+ + T+ +I +CR L Y VPK V F +ELPK++ GKI + LR+ A Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKD-GWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDPAL---TDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEA 553
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 67/218 (30.73%), Postives = 109/218 (50.00%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 665 GYG+TE+ + R +N +EK + G+ + + V+D SG S G+ GE+ ++G +M GYL +P T+ + +D W TGD+ DGYL I DR K++I P + +AAV A P+E GE P AFV ++ ++ +E+++I Y ++ Y + VV ++ +PK+ TGKI + L+ I N Sbjct: 357 GYGMTESTAVGT-----RGFN----SEKLSRYSSVGLLAPNM-QAKVVDWSSG-SFLPPGNR-GELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQ--ETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 560
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.426e-18 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 650 GYG+TE G ++ NL A +++ ++ +LD ++G S + + GEI +RG IM GY+ DP T + ++GW +TGDV + D + I DR K++I P++ +AAVV + E GE P AFV S+ +E+E+ E+ ++ Y V F+D +PK+ +GKI + LR Sbjct: 332 GYGMTEAGPVLAM-------NLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQA--GEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVV----KSSEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLR 531
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: LCFA_HAEIN (Long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=fadD PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 66/214 (30.84%), Postives = 94/214 (43.93%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 653 GYG+TE ++ +C + G + D+ K S + G GE+ ++G +M GY + P T + + D GW TGD+ +M L I DR KD+I+ V+EA + P GET FV K+ S T E+ +CR L Y VPK + F DELPKT+ GKI + VLR+ Sbjct: 358 GYGMTECSPLIAACP-------------INVVKHNGTIGVPVPNTDIKIIKDDGSDAKIGEA-GELWVKGDQVMRGYWQRPEATSEVLKD-GWMATGDIVIMDESYSLRIVDRKKDIILVSGFNVYPNEIEDVVMLNYKVSEAVAIGVPHAVSGETIKIFVVKKDDSL---TRDELRNHCRQYLTGYKVPKEIEFRDELPKTNVGKILRRVLRD 553 The following BLAST results are available for this feature:
BLAST of CK934313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934313 ID=CK934313; Name=CK934313; organism=Citrus sinensis; type=EST; length=818bpback to top |