CK934313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_STAAR (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MRSA252) GN=menE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYL--KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQK 638 GE++++G +M GYL D GT ++G+F TGD+ + +GY+ I DR KD+II P + +A V PD+ WG+ P + S+S ++ ++I Y L Y VPK +D LP TSTGK+Q+ Sbjct: 347 GELMIKGANVMNGYLYPTDLTGT----FENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGIIDAVCVGHPDDTWGQVPKLYFV----SESNISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 659 GY LTE+ G +AE+++ G T+ + E ++DP +G + + GE+ L+G I GY K+ T + + +GW TGD+ + DG+L + DR K++I P + +AAV+ PD+ G+ P A+V K +S +EK++I++ ++ Y + V F++ +PKT++GK + L ++A Sbjct: 345 GYALTESNG---------GGAFTNSAEESRRYGTAGTLTSDV-EARIVDPNTGRFMGINQT--GELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKH--ESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLA 546
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: ACSM4_MOUSE (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Mus musculus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 71/224 (31.70%), Postives = 99/224 (44.20%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGV--SAKRDGSTLGEIVLR-----GGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEK---EMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 653 GYG TE G + CA ++ + P + K +V ++D + S K GEI LR C Y+ +P T + + ++ TGD GVM DGY R+ DVII PAV E+AVV+ PD GE AF+ L K EK E+ ++ + Y P+ V F+ ELPKT TGKI++ VLR+ Sbjct: 369 GYGQTEVG---IICANRKGEAIKPGSMG---------KGVVPYDVQIIDENGNILPSGKE-----GEIALRLKSDRPFCFFSEYVDNPEKTDATIRRN-FYVTGDRGVMDDDGYFWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNREKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVLRD 574
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15 Identity = 58/206 (28.16%), Postives = 103/206 (50.00%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGK 629 GY LTE+ G S + + E+++ G+ + + E ++DP +G + + GE+ L+G I GY ++ + +T +GW TGD+ + +DG+L I DR K++I P + +AAV+ PD+ G+ P A+V+ K +S EK++I++ ++ Y + V F+D +PKT +GK Sbjct: 348 GYALTESNGAGAS---------IESVEESRRYGAVGLLSCGV-EARIVDPNTGQVMGLNQT--GELWLKGPSIAKGYFRNE---EEIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARK--PESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGK 536
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CL3_DICDI (Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum GN=4cl3 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15 Identity = 59/216 (27.31%), Postives = 96/216 (44.44%), Query Frame = 3 Query: 72 NLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTL---------------------GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYM-VPKTVVFMDELPKTSTGKIQKFVLRE 653 +L+ K +L +QG T L+ + P V + G+ L GEI ++G +MLGY + T + + DG+ TGD+G + DGY I DRSK++I P V +A VV GE P FV +K+ TEKE++++ K+ +Y + F+ +PK++TGK+ + L++ Sbjct: 332 DLIKERFKGRLVIKQGYGATELSPCCFVTPNGLVKSGSSGTLLPNLLAKIISSETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVDEDGYFFIIDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESL--TEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKD 545
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 62/219 (28.31%), Postives = 100/219 (45.66%), Query Frame = 3 Query: 12 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLRARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 668 GYG TE GGI + + + E+ G + T EV ++D +G GE+ +RG +M GY+ D +GW TGD+ + DG+L + DR K++I P + +AAV+ P E G+ P A V + GSK TE E++ ++ Y + V+F+D +PK+ +GKI + RE+ ++ Sbjct: 350 GYGSTEAGGI----------SRMISQEECNHIGSAG-RVTENVEVKIVDHVTGKPLP--AGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSKL--TEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILR---RELVNHL 550
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 52/150 (34.67%), Postives = 72/150 (48.00%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 650 GE+ L G IM GYL D C DGW TGD+ DGYL I R KD I P + + AV + DE GE P AFV + GS + K+++EY ++ Y + VVF++ +PK+ GK+ + +LR Sbjct: 427 GELWLHGPGIMKGYLSDDDDA--CTRKDGWLRTGDIAYFDLDGYLYIVGRLKDTIKYKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNL--SCKQVMEYVAKQVAPYKRVRKVVFVEAIPKSPAGKVLRRLLR 572
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_STAAU (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus GN=menE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYL--KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETP-CAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQK 638 GE++++G +M YL D GT ++G+F TGD+ + +GY+ I DR KD+II P +++A V PD+ WG+ P FVS + SK+ ++I Y L Y VPK +D LP TSTGK+Q+ Sbjct: 347 GELMIKGANVMNVYLYPTDLTGT----FENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA-----QLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_STAAT (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=menE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYL--KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETP-CAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQK 638 GE++++G +M YL D GT ++G+F TGD+ + +GY+ I DR KD+II P +++A V PD+ WG+ P FVS + SK+ ++I Y L Y VPK +D LP TSTGK+Q+ Sbjct: 347 GELMIKGANVMNVYLYPTDLTGT----FENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA-----QLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486
BLAST of CK934313 vs. ExPASy Swiss-Prot
Match: MENE_STAAE (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Newman) GN=menE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 201 GEIVLRGGCIMLGYL--KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGETP-CAFVSLKEGSKSKPTEKEMIEYCRGKLPHYMVPKTVVFMDELPKTSTGKIQK 638 GE++++G +M YL D GT ++G+F TGD+ + +GY+ I DR KD+II P +++A V PD+ WG+ P FVS + SK+ ++I Y L Y VPK +D LP TSTGK+Q+ Sbjct: 347 GELMIKGANVMNVYLYPTDLTGT----FENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA-----QLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486 The following BLAST results are available for this feature:
BLAST of CK934313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934313 ID=CK934313; Name=CK934313; organism=Citrus sinensis; type=EST; length=818bpback to top |