CK934325

Overview
NameCK934325
Unique NameCK934325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.480e-42
Identity = 105/219 (47.95%), Postives = 123/219 (56.16%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPS-----------VRANNNKRAXXXXXXXXXXXXCAFNA---------GDDDE-----------RDSAPPAKAQVVGWPPIRSYRKNTL---QVQAKTSESELCRG---MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            LK TELRLGLPGS  P              A   KR              A  A         G++DE              AP AKAQVVGWPPIRSYRKNT+   Q+++   ++E  +G   +YVKVSMDGAPYLRK+DLK Y  Y +L  ALE MF   T GK    E     +Y  TYEDKDGDWMLVGDVPW+MF  +C+RLRIM+GS+A GLA
Sbjct:   28 LKGTELRLGLPGSHSPDRSPPAATLDLLPAAKGAKRGFSDEARPLPASAAAAAAAGKGKKAAAGEEDEDAEEEDKKVAAAPQAPAAKAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLA 246          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.852e-42
Identity = 103/212 (48.58%), Postives = 121/212 (57.08%), Query Frame = 2
Query:  158 HLKATELRLGLPGSDKPS-VRANNNKRAXXXXXXXXXXXXCAFNAGD--------DDERDSA-------PPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIGKYSEREGY-------------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            +L+ TEL LGLPG D  + V  N    +             A   G         D +  SA       PPAKAQVVGWPP+RSYRKN + V  + S        +VKVSMDGAPYLRKIDL++Y  Y EL NAL NMF   T+GK+   EG              N  DY P+YEDKDGDWMLVGDVPW MF+ TCKRLR+M+GS+A GLA
Sbjct:    8 NLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVM-VSCQKSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLA 218          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40
Identity = 102/222 (45.95%), Postives = 127/222 (57.21%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSVR------------------ANNNKRAXXXXXXXXXXXXCA-----------FNAGDDDERDSAPP---AKAQVVGWPPIRSYRKNTL---QVQAKTSESELCRG---MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGS---DYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            LK TELRLGLPGS+ P  R                  A   KR              A             A ++D++ +APP   AKAQVVGWPPIRSYRKNT+   Q+++   + +  +G   +YVKVSMDGAPYLRK+DLK Y  Y ++   LE MF   IG  + +EG       +Y  TYEDKDGDWMLVGDVPW+MF  +C+RLRIM+GS+A GLA
Sbjct:   34 LKGTELRLGLPGSESPDRRPAAIAAAAATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAEEEDKKVAAPPQPAAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMF---IGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLA 252          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40
Identity = 100/217 (46.08%), Postives = 122/217 (56.22%), Query Frame = 2
Query:  158 HLKATELRLGLPGS----DKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSA------------PPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRG------MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSER------------EGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            +LK TEL LGLPG     + P+     NKR                    D   + A            PPAKAQVVGWPP+R+YRKN +  Q K+ E+E           +VKVSMDGAPYLRK+DLK+YT Y +L +AL  MF   T+G Y  +            +  N S+Y P+YEDKDGDWMLVGDVPW MF+ +CKRLRIM+GSEA GLA
Sbjct:    2 NLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQ-KSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLA 217          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.342e-40
Identity = 91/162 (56.17%), Postives = 103/162 (63.58%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRG-----------MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIGKYSER-----------EGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            A  D E+  AP  KAQVVGWPP+RSYRKN L VQA   +     G            +VKVSMDGAPYLRK+DLK+Y  Y EL  ALE MF   TIG                +  NGS+Y PTYEDKDGDWMLVGDVPW+MF+ +CKRLRIM+GSEA GLA
Sbjct:  107 AAADPEKPRAP--KAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLA 266          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.594e-39
Identity = 100/225 (44.44%), Postives = 122/225 (54.22%), Query Frame = 2
Query:  158 HLKATELRLGLPGS----DKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSA-------------PPAKAQVVGWPPIRSYRKNTLQVQAKTSESE-------------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSER------------EGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            +LKATEL LGLPG     + P+  A  +KR                    D +  SA             PPAKAQVVGWPP+R+YRKN +  Q  +S +E                   VKVSMDGAPYLRK+DLK+Y  Y +L +AL  MF   T+G Y  +               N S+Y P+YEDKDGDWMLVGDVPW+MF+ +CKRLRIM+GSEA GLA
Sbjct:    7 NLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 107/227 (47.14%), Postives = 127/227 (55.95%), Query Frame = 2
Query:  128 MERLLSFESDHL-KATELRLGLPGS--DKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDS---APP-AKAQVVGWPPIRSYRKNTLQVQ-----------------------------AKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            ME  + + +D L KATELRLGLPG+  D PS      + A                A DDDE D+   APP AKAQVVGWPP+RSYRK+  Q Q                             A +S +    G  VKVSMDGAPYLRKIDL++Y  Y EL  ALE MF    G     +G N S++A TY+DKDGD MLVGDVP+DMF +TCK+LRIM+ SEA GL
Sbjct:    1 MEAAVGYAADSLIKATELRLGLPGTADDLPSTPRGKKRAAAAEDNNANAA------AADDDEHDAVEAAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSG---AADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGL 218          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 83/150 (55.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  311 SAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCR----GMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIGKYSE--------------REGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            S P AKAQ+VGWPP+RSYRKNTL    K S+    R     ++VKVSMDGAPYLRK+DL+ YT Y EL +ALE MF   T+G+                 ++  NG DY  TYEDKDGDWMLVGDVPW+MFI  CK+L+IM+G +A GLA
Sbjct:  176 SPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLA 325          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 81/145 (55.86%), Postives = 94/145 (64.83%), Query Frame = 2
Query:  317 PPAKAQVVGWPPIRSYRKNTLQVQAKTSE----SELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGY-------------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            PPAK QVVGWPP+RS+RKN L VQ    E    +      +VKVSMDGAPYLRK+DLK+Y  Y EL ++L  MF        E +G              N SDY PTYEDKDGDWMLVGDVPW+MF+ +CKRLRIM+G EA GL
Sbjct:   85 PPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGL 229          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 84/147 (57.14%), Postives = 99/147 (67.35%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSEREGYNGS-------DYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            A  D ++  AP  KAQVVGWPP+RS+RKN L  + K +         VKVSMDGAPYLRKID+ +Y  YPEL  A +NMF   TIGK    +    S       +Y PTYEDKDGDWMLVGDVPW+MF+ +CKRLRIM+GSEA GLA
Sbjct:   87 AEPDPDKPRAP--KAQVVGWPPVRSFRKNVLAEKCKAAA-------LVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLRDDLEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLA 224          
The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA17_ORYSJ4.480e-4247.95Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA17_ARATH5.852e-4248.58Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
IAA3_ORYSJ2.459e-4045.95Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA14_ARATH2.459e-4046.08Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA30_ORYSJ9.342e-4056.17Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA7_ARATH1.594e-3944.44Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA12_ORYSJ6.056e-3947.14Auxin-responsive protein IAA12 OS=Oryza sativa sub... [more]
IAA9_ARATH3.925e-3855.33Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
AUX28_SOYBN5.126e-3855.86Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA11_ORYSJ8.744e-3857.14Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bp
GGGGATCAACTAACAGTTTCCAATCTCATTCAAAATTTGATTGAGTACAC
AAAATTAAAGTATATACATCATAATCCATAACAGAAAATTAAGAAGAAAA
AGTTTCAGCGAATTTGTTAGTGTAGCAATGGAGAGGTTGTTAAGTTTCGA
GAGTGACCATTTGAAGGCAACTGAGCTGCGATTAGGGTTGCCCGGAAGCG
ACAAGCCTAGTGTTAGAGCCAACAATAATAAGCGAGCTTCATCTGAGATT
TCTCAGGAGTCTAAGAGCAATTCTTGTGCTTTTAATGCTGGAGACGATGA
TGAAAGGGACAGTGCTCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCTC
CGATTCGATCATATCGCAAGAACACGTTGCAAGTACAAGCAAAGACAAGT
GAGAGTGAATTATGTCGGGGAATGTACGTTAAAGTAAGCATGGATGGAGC
TCCTTATCTGAGAAAGATAGATCTCAAGGTTTACACGTGCTATCCGGAGC
TGCTTAATGCCTTGGAAAATATGTTCCAGTTAACAATTGGCAAATATTCA
GAGAGGGAAGGCTACAATGGATCTGATTATGCCCCAACATACGAGGATAA
AGATGGTGATTGGATGCTCGTTGGCGATGTTCCGTGGGATATGTTTATTA
CCACTTGCAAGAGACTAAGAATCATGAGAGGGTCAGAAGCCAAAGGCTTA
GCCTGTGTATGAAATGAAATATGAACCCACCGAGT
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