CK934325

Overview
NameCK934325
Unique NameCK934325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 86/161 (53.42%), Postives = 106/161 (65.84%), Query Frame = 2
Query:  311 SAPPAKAQVVGWPPIRSYRKNTL---------------QVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIGKYSE-----REGYN---------GSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            +AP +KAQVVGWPPIRS+RKN++               + +AK+   + C  +YVKVSM+GAPYLRKIDLK Y  Y EL +ALE MF   TIG++       R+G N         GS+Y  TYEDKD DWMLVGDVPW+MFI +CK+LRIM+ SEA GLA
Sbjct:  136 TAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPC--LYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 91/191 (47.64%), Postives = 115/191 (60.21%), Query Frame = 2
Query:  173 ELRLGLPGSDK-PSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPA-KAQVVGWPPIRSYRKNTLQVQAKTS----------ESELCR-----GMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAK 694
            ELRLGLPGS     V A   + A            C   AG  D  D A PA K QVVGWPP+ SYR++T Q  + ++          E++  R     G+YVKVSMDGAPYLRK+DL++Y  Y EL +AL+ +F    G +S     + + +A  YEDKDGD ML GDVPWDMFI++CK+LRIMRGSEA+
Sbjct:    9 ELRLGLPGSGGGDGVAAKKRRSASSTVKSEASGTACCGGAGARDVEDGASPASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALF----GCFSADASASAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEAR 195          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 87/193 (45.08%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  170 TELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDE--------RDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF--QLTIGKYSERE-----GYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            T L L LPGS   S  ++++  +               +A DDD          +S P  KA+VVGWPP+R++RKN L   A  S S   +  +VKV++DGAPYLRK+DL+ Y  Y +LL AL++ F    TI K    E       +G++Y PTYEDKDGDWMLVGDVPW MF+ TC+RLR+M+ SEA  LA
Sbjct:   23 TALTLRLPGSSSSSSSSSSSSSSSSPSEPDRKRA----SATDDDPDNRLGSTATESPPSPKARVVGWPPVRAFRKNALAALAAASSS---KAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLA 208          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 98/217 (45.16%), Postives = 121/217 (55.76%), Query Frame = 2
Query:  176 LRLGLPGSDKP----------------SVRANNNKRAXXXXXXXXXXXXCAFNAG----DDDERDSAPPA-KAQVVGWPPIRSYRKNTLQVQAKTSESE---LCRG--MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF------QLTIGKYSEREGY-NGS--------DYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            LRLGLPGS+ P                +     +KRA             +  A     D     +APPA KAQVVGWPP+R+YRKNTL   A   + E      G  +YVKVSMDGAPYLRK+DLK+Y+ Y +L  ALE MF      Q  + K S R+   NGS        +Y  TYEDKD DWMLVGD+PWD+F T C++L+IMRGS+A G+A
Sbjct:   44 LRLGLPGSESPEREVVAAGLTLGPLPPTTTKAASKRAFPDSSPRHGASSGSVAAAAACQDKAAPAAAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIA 260          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 97/218 (44.50%), Postives = 120/218 (55.05%), Query Frame = 2
Query:  176 LRLGLPGSDKP----------------SVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPA------KAQVVGWPPIRSYRKNTLQVQAKTSESE---LCRG--MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF------QLTIGKYSEREGY-NGS--------DYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            LRLGLPGS+ P                +     +KRA             +  A     +D A PA      KAQVVGWPP+R+YRKNTL   A   + E      G  +YVKVSMDGAPYLRK+DLK+Y+ Y +L  ALE MF      Q  + K S R+   NGS        +Y  TYEDKD DWMLVGD+PWD+F T C++L+IMRGS+A G+A
Sbjct:   44 LRLGLPGSESPEREVVAAGLTLGPLPPTTTKAASKRAFPDSSPRHGASSGSVAAAAAACQDKAAPAAAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIA 261          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 81/155 (52.26%), Postives = 97/155 (62.58%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESE----------------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            A  D E+  AP  KAQ VGWPP+RS+R+N + VQ+  S+ E                     +VKVSMDGAPYLRK+DLK+Y  Y +L  AL+ MF       +     NGSD   TYEDKDGDWMLVGDVPW MF+ +CKRLRIM+GSEA GLA
Sbjct:   73 AAADAEKPPAP--KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLA 225          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 81/155 (52.26%), Postives = 97/155 (62.58%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESE----------------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            A  D E+  AP  KAQ VGWPP+RS+R+N + VQ+  S+ E                     +VKVSMDGAPYLRK+DLK+Y  Y +L  AL+ MF       +     NGSD   TYEDKDGDWMLVGDVPW MF+ +CKRLRIM+GSEA GLA
Sbjct:   73 AAADAEKPPAP--KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLA 225          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 2
Query:  293 DDDERDSAPPAKAQVVGWPPIRSYRKNTLQV-----------QAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIGK-----YSEREGY---------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            ++ ++  AP AKAQVVGWPPIRSYRKNT+ +           +AK + +  C  +YVKVSMDGAPYLRK+DLK+Y  Y EL  ALE MF   T+G       S R+G          NG++   TYEDKD DWMLVGDVPW MF  +C+RLRIM+GS+A GLA
Sbjct:   95 EEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGC--LYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLA 255          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 2
Query:  308 DSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESEL-----CRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ-LTIG-----------KYSE---REGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            ++AP AKAQVVGWPPIRSYRKNT+      +  E+        ++VKVSMDGAPYLRK+DL+ YT Y +L +ALE MF   T+G           + SE   ++  +GS++  TYEDKDGDWMLVGDVPW++F  TC++L+IM+GS++ GLA
Sbjct:  157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLA 308          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 100/235 (42.55%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  176 LRLGLPGSDKPSVRANNN--------------------KRAXXXXXXXXXXXXCAFNAGDDD--------------ERDSAPP--AKAQVVGWPPIRSYRKNTLQVQAKTSESE--------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIG------KYSERE---------GYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            LRLGLPGS+ P+ RA                       KR              A  AGDD+              E  +  P  AKAQVVGWPP+RSYRKNTL   A  ++ E         C   YVKVSMDGAPYLRK+DLK Y+ Y +L  ALE MF   I       K S+R+              +Y  TYEDKD DWMLVGD+PWD+F T+C++LRIMRGS+A G+A
Sbjct:   40 LRLGLPGSESPA-RAEAEAVVVDAALTLGPAPPPRGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGAPRAAKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCC---YVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMA 270          
The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA27_ARATH1.492e-3753.42Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA14_ORYSJ2.544e-3747.64Auxin-responsive protein IAA14 OS=Oryza sativa sub... [more]
IAA15_ORYSJ1.263e-3645.08Auxin-responsive protein IAA15 OS=Oryza sativa sub... [more]
IAA5_ORYSJ2.154e-3645.16Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA5_ORYSI2.154e-3644.50Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA13_ORYSJ2.154e-3652.26Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA13_ORYSI2.154e-3652.26Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA21_ORYSJ3.674e-3652.76Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
IAA8_ARATH6.266e-3651.97Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA19_ORYSJ6.266e-3642.55Auxin-responsive protein IAA19 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bp
GGGGATCAACTAACAGTTTCCAATCTCATTCAAAATTTGATTGAGTACAC
AAAATTAAAGTATATACATCATAATCCATAACAGAAAATTAAGAAGAAAA
AGTTTCAGCGAATTTGTTAGTGTAGCAATGGAGAGGTTGTTAAGTTTCGA
GAGTGACCATTTGAAGGCAACTGAGCTGCGATTAGGGTTGCCCGGAAGCG
ACAAGCCTAGTGTTAGAGCCAACAATAATAAGCGAGCTTCATCTGAGATT
TCTCAGGAGTCTAAGAGCAATTCTTGTGCTTTTAATGCTGGAGACGATGA
TGAAAGGGACAGTGCTCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCTC
CGATTCGATCATATCGCAAGAACACGTTGCAAGTACAAGCAAAGACAAGT
GAGAGTGAATTATGTCGGGGAATGTACGTTAAAGTAAGCATGGATGGAGC
TCCTTATCTGAGAAAGATAGATCTCAAGGTTTACACGTGCTATCCGGAGC
TGCTTAATGCCTTGGAAAATATGTTCCAGTTAACAATTGGCAAATATTCA
GAGAGGGAAGGCTACAATGGATCTGATTATGCCCCAACATACGAGGATAA
AGATGGTGATTGGATGCTCGTTGGCGATGTTCCGTGGGATATGTTTATTA
CCACTTGCAAGAGACTAAGAATCATGAGAGGGTCAGAAGCCAAAGGCTTA
GCCTGTGTATGAAATGAAATATGAACCCACCGAGT
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