CK934325

Overview
NameCK934325
Unique NameCK934325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQA------------KTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAK 694
            AGD+ + D+A PAKAQVVGWPP+R+YR+NT    A            K  + +   G+YVKVSMDGAPYLRK+DLK+   Y EL  AL+ +F       +  +G +   +A  YEDKDGD MLVGDVPW+MFI++CK+LRIM+GSEA+
Sbjct:   73 AGDEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATAS-DGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEAR 219          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 74/139 (53.24%), Postives = 97/139 (69.78%), Query Frame = 2
Query:  308 DSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF--QLTIGKYSERE-----GYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            D+ P  KA+VVGWPP+RS+RKN L  +            +VKV++DGAPYLRK+DL+ Y+ Y +LL AL++ F    TI K+++ E       NG++Y PTYEDKDGDWMLVGDVPW MF+ TC+RLR+M+ SEA  LA
Sbjct:   68 DAPPAPKARVVGWPPVRSFRKNALAAK------------FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLA 194          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34
Identity = 86/182 (47.25%), Postives = 111/182 (60.99%), Query Frame = 2
Query:  161 LKATELRLGLPGSD-KPSV--RANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLP ++ + SV  + N  KRA             +   GD     +    K+QVVGWPP+ SYRK       K S +E    MYVKVSMDGAP+LRKIDL ++  Y +L  AL+ +F    G     +  + S++ P YEDKDGDWMLVGDVPW+MF+ +CKRLRIM+ S+AKG
Sbjct:    8 LEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMETN----KSQVVGWPPVCSYRK-------KNSMNEGASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGC-YGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKG 177          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 81/189 (42.86%), Postives = 105/189 (55.56%), Query Frame = 2
Query:  170 TELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPA-KAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTI----GKYSEREG------YNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            T L L LPGS   S    + +R                 A   D  D+ PP+ KA+ VGWPP+R+YR+N L+        +  R   VKV++DGAPYLRK+DL  +  Y  LL AL  MF   +    G   + EG        G++Y PTYEDKDGDWMLVGDVPW MF+ +CKR+R+M+ SEA  L+
Sbjct:   21 TALTLALPGSSSSSSSTADPERK---------------RAAHADHADAKPPSPKARAVGWPPVRAYRRNALR-------EDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLS 187          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.485e-33
Identity = 83/183 (45.36%), Postives = 107/183 (58.47%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSVRANN----NKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLP ++  +V   N    NKR              +   GD    +     K QVVGWPP+ SYRK       K S +E  + MYVKVSMDGAP+LRK+DL ++  Y +L  ALE +F    G     +     ++ P YEDKDGDWMLVGDVPW+MF+ +CKRLRIM+ ++AKG
Sbjct:    8 LEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKMEN-----KNQVVGWPPVCSYRK-------KNSVNEASK-MYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGC-YGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKG 176          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.203e-32
Identity = 83/184 (45.11%), Postives = 106/184 (57.61%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSV----RANNNKRAXXXXXXXXXXXXCAFNAGDDDER-DSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLPG D        RA                     ++G D E+ + +P AK+QVVGWPP+ SYRK     +A T++  L    YVKVSMDG PYLRK+DL     Y +L  AL+ +F       + ++G N  +Y   YEDKDGDWML GDVPW MF+ +CKRLRIM+ S+A G
Sbjct:    8 LEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG---YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDN-CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATG 187          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32
Identity = 83/179 (46.37%), Postives = 105/179 (58.66%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGL   +    + N  KR                N G  D +  +   K QVVGWPP+ SYRK  +   +K         MY+KVSMDGAPYLRKIDL ++  Y EL  ALE +F     + + ++  N  ++ P YEDKDGDWMLVGDVPW+MFI +CKRLRIM+ S+AKG
Sbjct:    8 LEITELRLGLSCGEP---KKNEKKRMFSEIDGGVEE-----NGGSGDRK--SVDKKNQVVGWPPVCSYRKKNMNEGSK---------MYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDCCGIEEALKDAEN-CEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.364e-32
Identity = 80/182 (43.96%), Postives = 100/182 (54.95%), Query Frame = 2
Query:  161 LKATELRLGLPGS---DKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLPG+   +      N NK+                      E D     K QVVGWPP+ SYRK     + K         +YVKVSMDGAP+LRKIDL ++  Y +L  AL+  F    G     +    +++ P YEDKDGDWMLVGDVPW+MF  +CKRLRIM+ S+AKG
Sbjct:    8 LEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIE---------GENSSSEEDGKKETKNQVVGWPPVCSYRKKNTVNEPK---------LYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGC-YGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.306e-30
Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERD--SAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLPG    S  + + K+                 A  + E D    P  K+QVVGWPP+ SYR+     + K+S        YVKVS+DGA +LRKIDL++Y CY +L +AL+ +F   I   +  +    S+  P YEDKDGDWML GDVPW+MF+ +CKRLRIM+ S  +G
Sbjct:   10 LEITELRLGLPGDIVVSGESISGKK----------------RASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSS--------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI---NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCNRG 163          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 76/185 (41.08%), Postives = 100/185 (54.05%), Query Frame = 2
Query:  161 LKATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDD-----ERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGM-YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKG 697
            L+ TELRLGLPG +   +    + +                   ++      E +S P  K+Q VGWPP+ SYR+       K +  E  + + YVKVSMDG PY+RKIDL     Y  L+  LEN+F   +G    +EG    +Y   YEDKD DWMLVGDVPW MF  +CKRLRI++ S+A G
Sbjct:    8 LEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVEDESLPVVKSQAVGWPPVCSYRR-------KKNNEEASKAIGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGC-LGIGVAKEGKK-CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183          
The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA24_ORYSJ8.184e-3652.03Auxin-responsive protein IAA24 OS=Oryza sativa sub... [more]
IAA1_ORYSJ1.069e-3553.24Auxin-responsive protein IAA1 OS=Oryza sativa subs... [more]
AUX22_SOYBN2.016e-3447.25Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
IAA23_ORYSJ2.911e-3342.86Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
AX22A_PHAAU6.485e-3345.36Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA19_ARATH4.203e-3245.11Auxin-responsive protein IAA19 OS=Arabidopsis thal... [more]
IAA6_PEA5.490e-3246.37Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA... [more]
AX22C_PHAAU9.364e-3243.96Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA5_ARATH2.306e-3043.65Auxin-responsive protein IAA5 OS=Arabidopsis thali... [more]
IAA6_ARATH1.653e-2841.08Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bp
GGGGATCAACTAACAGTTTCCAATCTCATTCAAAATTTGATTGAGTACAC
AAAATTAAAGTATATACATCATAATCCATAACAGAAAATTAAGAAGAAAA
AGTTTCAGCGAATTTGTTAGTGTAGCAATGGAGAGGTTGTTAAGTTTCGA
GAGTGACCATTTGAAGGCAACTGAGCTGCGATTAGGGTTGCCCGGAAGCG
ACAAGCCTAGTGTTAGAGCCAACAATAATAAGCGAGCTTCATCTGAGATT
TCTCAGGAGTCTAAGAGCAATTCTTGTGCTTTTAATGCTGGAGACGATGA
TGAAAGGGACAGTGCTCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCTC
CGATTCGATCATATCGCAAGAACACGTTGCAAGTACAAGCAAAGACAAGT
GAGAGTGAATTATGTCGGGGAATGTACGTTAAAGTAAGCATGGATGGAGC
TCCTTATCTGAGAAAGATAGATCTCAAGGTTTACACGTGCTATCCGGAGC
TGCTTAATGCCTTGGAAAATATGTTCCAGTTAACAATTGGCAAATATTCA
GAGAGGGAAGGCTACAATGGATCTGATTATGCCCCAACATACGAGGATAA
AGATGGTGATTGGATGCTCGTTGGCGATGTTCCGTGGGATATGTTTATTA
CCACTTGCAAGAGACTAAGAATCATGAGAGGGTCAGAAGCCAAAGGCTTA
GCCTGTGTATGAAATGAAATATGAACCCACCGAGT
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