CK934325

Overview
NameCK934325
Unique NameCK934325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 74/186 (39.78%), Postives = 100/186 (53.76%), Query Frame = 2
Query:  149 ESDHLKATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ--LTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            +S  L  TEL L LPG+      A+   +                    ++   S+     Q+VGWPP+ + RK               R  YVKV++DGA YLRK+DL +Y CY +L  ALENMFQ  +TI + +E E     ++  TYEDKDGD MLVGDVPW MF+ +CKR+R+M+  +A GL
Sbjct:   12 DSGDLGGTELTLALPGTP---TNASEGPKKFGNKRRFLETVDLKLGEAHENNYISSMVTNDQLVGWPPVATARKTV-------------RRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELE--RKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.827e-27
Identity = 75/170 (44.12%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESE-------------------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYS-EREGY----------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            AG     DS      QVVGWPPIR+YR N++  QAK S +E                   +   M+VKV+MDG P  RKIDL  + CY  L N LE MF +  +G  + E +G+            S    TYEDK+GDWMLVGDVPW MFI + +RLRIM+ SEA G A
Sbjct:   73 AGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24
Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 2
Query:  398 SESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQL-TIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            S S +    +VKVSMDG PYLRK+D+  Y  Y EL+ AL +MF   TIG     +GY   ++A  YED DGDWMLVGDVPW+MF+++CKR+R+MR  EA+GL+
Sbjct:   38 SSSMIQAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLM---DGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 68/158 (43.04%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  317 PPAKAQVVGWPPIRSYRKNTLQVQAK------------TSESELCRGM-----------YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSEREGY------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            P +   VVGWPPIR +R N+L  QAK            T+ES++ +             +VKV+MDG    RK+DL  +  Y  L  ALE MF + +IG  +           N ++Y  TYED+DGDWMLVGDVPW+MF+++ KRLRIMR S+A GL
Sbjct:  106 PHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGL 263          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 68/158 (43.04%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  317 PPAKAQVVGWPPIRSYRKNTLQVQAK------------TSESELCRGM-----------YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF-QLTIGKYSEREGY------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            P +   VVGWPPIR +R N+L  QAK            T+ES++ +             +VKV+MDG    RK+DL  +  Y  L  ALE MF + +IG  +           N ++Y  TYED+DGDWMLVGDVPW+MF+++ KRLRIMR S+A GL
Sbjct:  106 PHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGL 263          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 67/164 (40.85%), Postives = 88/164 (53.66%), Query Frame = 2
Query:  311 SAPPAKAQVVGWPPIRSYRKNTL--QVQAKTSESELCRGM----------------------YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF----QLTIGKYSE-----REGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            S P + +QVVGWPPI S+R N+L      K++  E   G                       ++KV+MDG    RK+DL  ++ Y  L   LE+MF      T+G  S+     R     S++  TYEDK+GDWMLVGDVPW MFI + KRLR+M+ SEA GLA
Sbjct:   69 SPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 2
Query:  284 NAGDDDERDSAPPAKAQVVGWPPIRSYRKNTL-------QVQAKTSESEL------------------CRGM-YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGY------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            +A     + ++PP  +QVVGWPPI  +R N+L         +A+  + E                    +G+ +VKV+MDG    RK+D++ ++ Y  L   LE MF    G     +          SD+  TYEDK+GDWMLVGDVPW MFI + KRLRIM  SEA GLA
Sbjct:   53 SAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22
Identity = 58/163 (35.58%), Postives = 83/163 (50.92%), Query Frame = 2
Query:  290 GDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESE-------------------LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSER-----------EGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            G +  + S   A A VVGWPP+RS+R+N     + +S+                       +GM+VK++MDG P  RK+DL  Y  Y +L  A++ +F+  +   S             E   G +Y   YED +GD MLVGDVPW MFI T KRLR+++ S+
Sbjct:   56 GTNASKPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21
Identity = 72/226 (31.86%), Postives = 103/226 (45.58%), Query Frame = 2
Query:  152 SDHLKATELRLGLPGSDKP---SVRANNNKRAXXXXXXXXXXXXCAFNAGD---DDERDSAP------PAKAQVVGWPPIRSYRKNTLQVQAKTSESELCR-----------------------GMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSD------------YAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            +D  K  ELRLG PG D+    +++  N +              C FN       ++  S P       A   VVGWPP+RS+RKN     A TS S+L                         GM+VK++MDG P  RK+DL  Y  Y +L   ++ +F+  +    +     G +            +  TYED +GD MLVGDVPW MF+++ KRLR+++ SE
Sbjct:   32 TDQEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHC-FNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNL----ASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 52/129 (40.31%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  329 AQVVGWPPIRSYRKNT---LQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYN-GSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 703
            A VVGWPP+RS R+N    L+ + K  ES+  + +YVK++M+G P  RK++L  Y  Y +L +A++ +F       S+++ ++    Y   YED +GD +LVGDVPW+MF++T KRL +++ S A  L+
Sbjct:   47 APVVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-------SKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168          
The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA15_ARATH1.653e-2839.78Auxin-responsive protein IAA15 OS=Arabidopsis thal... [more]
IAA11_ARATH1.827e-2744.12Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA26_ORYSJ1.109e-2454.37Auxin-responsive protein IAA26 OS=Oryza sativa sub... [more]
IAA10_ORYSJ1.226e-2343.04Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI1.226e-2343.04Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA13_ARATH7.946e-2340.85Auxin-responsive protein IAA13 OS=Arabidopsis thal... [more]
IAA12_ARATH1.355e-2238.37Auxin-responsive protein IAA12 OS=Arabidopsis thal... [more]
IAA2_ORYSJ8.785e-2235.58Auxin-responsive protein IAA2 OS=Oryza sativa subs... [more]
IAA26_ARATH1.957e-2131.86Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
IAA28_ARATH3.338e-2140.31Auxin-responsive protein IAA28 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bp
GGGGATCAACTAACAGTTTCCAATCTCATTCAAAATTTGATTGAGTACAC
AAAATTAAAGTATATACATCATAATCCATAACAGAAAATTAAGAAGAAAA
AGTTTCAGCGAATTTGTTAGTGTAGCAATGGAGAGGTTGTTAAGTTTCGA
GAGTGACCATTTGAAGGCAACTGAGCTGCGATTAGGGTTGCCCGGAAGCG
ACAAGCCTAGTGTTAGAGCCAACAATAATAAGCGAGCTTCATCTGAGATT
TCTCAGGAGTCTAAGAGCAATTCTTGTGCTTTTAATGCTGGAGACGATGA
TGAAAGGGACAGTGCTCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCTC
CGATTCGATCATATCGCAAGAACACGTTGCAAGTACAAGCAAAGACAAGT
GAGAGTGAATTATGTCGGGGAATGTACGTTAAAGTAAGCATGGATGGAGC
TCCTTATCTGAGAAAGATAGATCTCAAGGTTTACACGTGCTATCCGGAGC
TGCTTAATGCCTTGGAAAATATGTTCCAGTTAACAATTGGCAAATATTCA
GAGAGGGAAGGCTACAATGGATCTGATTATGCCCCAACATACGAGGATAA
AGATGGTGATTGGATGCTCGTTGGCGATGTTCCGTGGGATATGTTTATTA
CCACTTGCAAGAGACTAAGAATCATGAGAGGGTCAGAAGCCAAAGGCTTA
GCCTGTGTATGAAATGAAATATGAACCCACCGAGT
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