CK934325

Overview
NameCK934325
Unique NameCK934325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20
Identity = 65/211 (30.81%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  164 KATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKN-------------------TLQVQ-----AKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIG-------KYSEREGYNG-----SDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            K  EL+LG PG +        + +               F+            A   VVGWPP+RS+RKN                   TL+ Q     AKT+E +   GM+VK++M G P  RK+DL  +  Y +L   ++ +F+  +           + +   G      +Y  TYED +GD MLVGDVPW MF+++ KRLR+++ SE
Sbjct:   40 KKLELKLGPPGEEDDDESMIRHMKKEPKDKSILSLAGKYFSPSSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19
Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 2
Query:  278 AFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQV------------QAKTSESELCRGM-YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSE----REGYNGSD-------------YAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            A ++ +   R + PP    VVGWPPIRS+R+N                +A      +C+    VK++MDG P  RK+DL++Y  Y +L +A+E +F+  +    +      G  G++             Y   YED DGD ML GD+PW +F++T KRLR+MR SE
Sbjct:  153 AAHSSNPQGRGAIPP----VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  311 SAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTI--GKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMR 679
            S  P +     WPPI+S  ++TL+ +      +    ++VKV M+G P  RK+DL V++ Y  LL  L +MF  +I  G    +       +  TYEDKDGDWM+VGD+PWDMF+ T +RL+I R
Sbjct:   37 STSPQREARQDWPPIKSRLRDTLKGRRLLRRGD-DTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKH------HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.025e-18
Identity = 70/219 (31.96%), Postives = 100/219 (45.66%), Query Frame = 2
Query:  149 ESDHLKATELRLGLPGSDKPSVRANNNKRAXXXXXXXXXXXXCAFNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRG--------------MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKY-------------------SEREGYNG------SDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            + +  ++ EL L LPG    S    N   A             A  A  +D   ++ PA A VVGWPP+RS+R+N   + + +S S+  RG               +VKV+MDG P  RK+DL  +  Y EL  A++ +F+  +                       E E   G       +Y   YED +GD MLVGDVPW+MFI   +RLR++R S+
Sbjct:   10 DGEEERSLELSLALPGYFSSSGLQGNTSTA-------------ADGAKGNDGFKASRPA-APVVGWPPVRSFRRN---LASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSD 211          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18
Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  323 AKAQVVGWPPIRSYRKNTLQVQAKTSESE------------LCR-GMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMF----QLTIGKYSEREGYNGSD-------------YAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            A A VVGWPPIRS+R+N     +     E             C+    VK++MDG P  RKIDL  Y  Y  L +A++ +F    Q    + + +    G+D             Y   YED +GD MLVGDVPW +F++T KRLR++R SE
Sbjct:  172 AAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18
Identity = 67/187 (35.83%), Postives = 85/187 (45.45%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQV-----VGWPPIRSYRKNTLQVQAKT--SESELCRG---------------------------MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKY--SEREGYN-------------GSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGL 700
            +G     DS+P A +       VGWPP+R+YR N+L  QAK+  +E  L  G                           M VKV+MDG    RK+DL     Y  L   L+ MF         S  +GY               S+Y  TY+DKDGDWMLVGDVPW MF+ +  RLRIM+ S   G+
Sbjct:   73 SGTKRSADSSPAAASNATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA20_ORYSJ (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica GN=IAA20 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 2
Query:  290 GDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGS---DYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIM 676
            GD D        + ++VGWPP++   +              C G YVKV M+G    RK+DL +   Y ELL+ L  MF  T    ++ +G++      YA TYED +GDWM VGDVPW+ F  + KRL+I+
Sbjct:   64 GDGDSDGEMGNKRRKLVGWPPVKCLHRR---------RDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPST----NQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKIL 182          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17
Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 2
Query:  335 VVGWPPIRSYRKNT---------LQVQAKTSESE-LCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ---------LTIGK---YSEREGYNG-----SDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSE 688
            VVGWPP+R++R+N          LQ   K +++E + R  ++K++MDG P  RKIDL  +  Y +L  A++ +F+         LT G      E    +G      +Y   YED +GD +LVGDVPW MF+++ KRLR+++ S+
Sbjct:  139 VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSJ (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica GN=IAA4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSE--SELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNG-----SDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMR 679
            A  DD   S P        WPPI+ + ++ LQ  +      +   R ++VKV M+G P  RK+DL +   Y  LL  L +MF+  I      E +       + +  TYED+DGDWM+VGDVPW++F+++ K+LRI R
Sbjct:   62 AAADDSIPSTPRNSQVHADWPPIKPFLRSALQKASAAGGGGARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQKAAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199          
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSI (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica GN=IAA4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  287 AGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSE--SELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNG-----SDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMR 679
            A  DD   S P        WPPI+ + ++ LQ  +      +   R ++VKV M+G P  RK+DL +   Y  LL  L +MF+  I      E +       + +  TYED+DGDWM+VGDVPW++F+++ K+LRI R
Sbjct:   62 AAADDSIPSTPRNSQVHADWPPIKPFLRSALQKASAAGGGGARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQKAAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199          
The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA18_ARATH8.222e-2030.81Auxin-responsive protein IAA18 OS=Arabidopsis thal... [more]
IAA18_ORYSJ3.124e-1934.73Auxin-responsive protein IAA18 OS=Oryza sativa sub... [more]
IAA31_ARATH9.091e-1940.80Auxin-responsive protein IAA31 OS=Arabidopsis thal... [more]
IAA16_ORYSJ2.025e-1831.96Auxin-responsive protein IAA16 OS=Oryza sativa sub... [more]
IAA6_ORYSJ2.645e-1837.50Auxin-responsive protein IAA6 OS=Oryza sativa subs... [more]
IAA10_ARATH2.645e-1835.83Auxin-responsive protein IAA10 OS=Arabidopsis thal... [more]
IAA20_ORYSJ2.239e-1737.88Auxin-responsive protein IAA20 OS=Oryza sativa sub... [more]
IAA7_ORYSJ2.924e-1736.55Auxin-responsive protein IAA7 OS=Oryza sativa subs... [more]
IAA4_ORYSJ6.515e-1736.96Auxin-responsive protein IAA4 OS=Oryza sativa subs... [more]
IAA4_ORYSI6.515e-1736.96Auxin-responsive protein IAA4 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bp
GGGGATCAACTAACAGTTTCCAATCTCATTCAAAATTTGATTGAGTACAC
AAAATTAAAGTATATACATCATAATCCATAACAGAAAATTAAGAAGAAAA
AGTTTCAGCGAATTTGTTAGTGTAGCAATGGAGAGGTTGTTAAGTTTCGA
GAGTGACCATTTGAAGGCAACTGAGCTGCGATTAGGGTTGCCCGGAAGCG
ACAAGCCTAGTGTTAGAGCCAACAATAATAAGCGAGCTTCATCTGAGATT
TCTCAGGAGTCTAAGAGCAATTCTTGTGCTTTTAATGCTGGAGACGATGA
TGAAAGGGACAGTGCTCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCTC
CGATTCGATCATATCGCAAGAACACGTTGCAAGTACAAGCAAAGACAAGT
GAGAGTGAATTATGTCGGGGAATGTACGTTAAAGTAAGCATGGATGGAGC
TCCTTATCTGAGAAAGATAGATCTCAAGGTTTACACGTGCTATCCGGAGC
TGCTTAATGCCTTGGAAAATATGTTCCAGTTAACAATTGGCAAATATTCA
GAGAGGGAAGGCTACAATGGATCTGATTATGCCCCAACATACGAGGATAA
AGATGGTGATTGGATGCTCGTTGGCGATGTTCCGTGGGATATGTTTATTA
CCACTTGCAAGAGACTAAGAATCATGAGAGGGTCAGAAGCCAAAGGCTTA
GCCTGTGTATGAAATGAAATATGAACCCACCGAGT
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