CK934325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA20_ARATH (Auxin-responsive protein IAA20 OS=Arabidopsis thaliana GN=IAA20 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 386 QAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGS 685 + + +E YVKV+M+G P RKIDL Y +L+ L+ MF +I E + N + TY DK+GDWM+VGDVPW+MF++T +RL+I R + Sbjct: 73 EEEENECNSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA30_ARATH (Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16 Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 281 FNAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMR 679 +N GD+ E D A+ ++ + + +E YVKV+M+G P RKIDL Y +L+ L+ MF +I E + + + TY DK+GDWM+VGDVPW+MF+++ +RL+I R Sbjct: 49 YNGGDNHEYDGVGAAEEMMI-------------MEEEEQNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 302 ERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSES-----ELCRG-----------------MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ--LTIG------KYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRI 673 +R++ + AQ+VGWPP+R++RKN + ++ +LC M+VKV+++G RKIDLK + Y L AL++MF L+ G + + E + Y YED +GD MLVGDVPW++FI + KRL I Sbjct: 82 QRENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16 Identity = 56/136 (41.18%), Postives = 68/136 (50.00%), Query Frame = 2 Query: 284 NAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRGM-YVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTI--GKYSEREGYNGSDYAP--TYEDKDGDWMLVGDVPWDMFITTCKRLRIM 676 N DDD R K VVGWPP+ S R+ C G YVKV +G RK+DL +++ Y EL L MF G+ +G P TYED DGDWMLVGDVPWD F + KRL+I+ Sbjct: 63 NTSDDDCRRR----KKTVVGWPPVSSARR-------------ACGGANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA8_ORYSJ (Auxin-responsive protein IAA8 OS=Oryza sativa subsp. japonica GN=IAA8 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 416 RGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGY-------NGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLAC 706 R ++VKV M+G P RK+DL Y L+ L +MF+ +I + + N + TYED++GDWM+ GDVPW++F+T+ KRLRI R + +C Sbjct: 102 RSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADDKYCYSC 205
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13 Identity = 51/148 (34.46%), Postives = 72/148 (48.65%), Query Frame = 2 Query: 287 AGDDDERDSAPPAKAQVVGWPPIRSYRKN----------TLQVQAK------------TSESELCRGMYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQ--LTIG------KYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWD 640 AG ++ ++ + AQ+VGWPP+R++RKN L + K E M+VKV+++G RKIDLK + Y L AL++MF L+ G + E + Y YED +GD MLVGDVPWD Sbjct: 25 AGWNESGENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNEGDRMLVGDVPWD 172
BLAST of CK934325 vs. ExPASy Swiss-Prot
Match: IAA29_ARATH (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana GN=IAA29 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 55/175 (31.43%), Postives = 78/175 (44.57%), Query Frame = 2 Query: 293 DDDERDSAPPAKAQVVGWPPIR-------SYRKN----------------------------TLQVQAKTSESELCRG-MYVKVSMDGAPYLRKIDLKVYTCYPELLNALENMFQLTIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLACV 709 DD+E +S +VVGWPP++ SY T V + +S S R MYVKV MDG RK+D+K++ Y L N+L MF T + +RE N Y T++ K+GDW+L GDV W +F + R+ I+R C+ Sbjct: 87 DDEEENS------EVVGWPPVKTCMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMF--TEYEDCDREDTN---YTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIRDRPCAYTRCL 250 The following BLAST results are available for this feature:
BLAST of CK934325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934325 ID=CK934325; Name=CK934325; organism=Citrus sinensis; type=EST; length=735bpback to top |