CK934331

Overview
NameCK934331
Unique NameCK934331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1673 contig Csv1_Contig1673:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17
Identity = 37/87 (42.53%), Postives = 66/87 (75.86%), Query Frame = 3
Query:  630 RTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFV 890
            R ++G Y LG TLG G+F KV+  ++  TG  VA+KIL+++K+    ++G+I+REI  +KL RHP++I++Y+V+++ + I++V+E+V
Sbjct:   21 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 107          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SNRK_RAT (SNF-related serine/threonine-protein kinase OS=Rattus norvegicus GN=Snrk PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  603 MASRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            MA    G      G Y+L +TLG G FA V+ AR+  TGE VA+K++DK K L     G + +E+  MKL++HPN++R+YEV+ ++TK+Y++LE
Sbjct:    1 MAGFKRGYDGKIAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-LDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 93          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SNRK_MOUSE (SNF-related serine/threonine-protein kinase OS=Mus musculus GN=Snrk PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  603 MASRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            MA    G      G Y+L +TLG G FA V+ AR+  TGE VA+K++DK K L     G + +E+  MKL++HPN++R+YEV+ ++TK+Y++LE
Sbjct:    1 MAGFKRGYDGKIAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-LDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 93          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SNRK_HUMAN (SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  603 MASRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            MA    G      G Y+L +TLG G FA V+ AR+  TGE VA+K++DK K L     G + +E+  MKL++HPN++R+YEV+ ++TK+Y++LE
Sbjct:    1 MAGFKRGYDGKIAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-LDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 93          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 3
Query:  648 YELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFV 890
            Y+LG+TLG GSF KV+ A +  TG  VAIKIL++ K+   +M  +++REI  ++L  HP++IR YEV+ + + IY+V+E+V
Sbjct:   20 YKLGKTLGIGSFGKVKIAEHVVTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRQYEVIETTSDIYVVMEYV 100          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            RVG Y++ RTLG+G+FA V+ AR+  T   VAIKI+DK + L    + +I RE+  MKL+ HPN+I++Y+VM +K  +YIV EF
Sbjct:   23 RVGFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDSSNLEKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEF 105          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            RVG Y++ RTLG+G+FA V+ AR+  T   VAIKI+DK + L    + +I RE+  MKL+ HPN+I++Y+VM +K  +YIV EF
Sbjct:   23 RVGFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDSSNLEKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEF 105          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 3
Query:  642 GKYELGRTLGEGSFAKVEFARNTETG-ENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            GKY+LG+ LG G+FAKV  A + + G E+VAIK++ K++ LK  +   +KREIS M+ +RHP+++ + EV+A+KTKIY V+E
Sbjct:   26 GKYDLGKLLGSGAFAKVYQAEDLQNGGESVAIKVVQKKR-LKDGLTAHVKREISVMRRLRHPHIVLLSEVLATKTKIYFVME 106          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            RVG Y++ RTLG+G+FA V+ AR+  T   VAIKI+DK + L    + +I RE+  MKL+ HP++I++Y+VM +K  +YIV EF
Sbjct:   23 RVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDSSNLEKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEF 105          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 3
Query:  582 AKIEGKDMASRTGGASRT----RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            A+  G+   S    A R      VGKY+L +T+G+G+FAKV+ A++  TG  VAIKI+DK   L    + ++ RE+  MK + HPN++++Y+VM ++  +Y+VLE+
Sbjct:  102 ARSSGQSGMSSRSAARRNDQDVHVGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDK-TALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEY 206          
The following BLAST results are available for this feature:
BLAST of CK934331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
AAPK1_HUMAN5.244e-1742.535'-AMP-activated protein kinase catalytic subunit ... [more]
SNRK_RAT4.439e-1644.68SNF-related serine/threonine-protein kinase OS=Rat... [more]
SNRK_MOUSE4.439e-1644.68SNF-related serine/threonine-protein kinase OS=Mus... [more]
SNRK_HUMAN4.439e-1644.68SNF-related serine/threonine-protein kinase OS=Hom... [more]
KIN11_ARATH9.890e-1646.91SNF1-related protein kinase catalytic subunit alph... [more]
SIK1_RAT2.203e-1550.00Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]
SIK1_MOUSE2.203e-1550.00Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]
CIPKM_ARATH2.877e-1550.00CBL-interacting serine/threonine-protein kinase 22... [more]
SIK1_HUMAN6.410e-1548.81Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
PAR1_CAEBR6.410e-1539.62Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_D02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934331 ID=CK934331; Name=CK934331; organism=Citrus sinensis; type=EST; length=892bp
GGGGATAATTAAAATTTTCTGACACCAAATACTTCGCCTACGATCCAGCT
CCCAAAATTTCTTCGCAAGAATCTCCTCAATAATTCACGTAGATGTACGT
CTCTGATTTATCTTCTCAGTGCAAGCCCCTTTATAGATCCGTGCGCTAAT
TAATTATTATGATTATTATTTCTTTATTCGACTGAAATTTGCGAGTAAAT
ACTTCGATTTTGCCAAAATCATAATTTACATCCTTTCTCGGCTGATTCAC
TCGATTCCATGGGGTCCATGTCTGATCTGTCGGTCACAATCTCTCATCGA
TTCGTCCTGAATTGTCGAGGTTTGAGTTTTTGAATTTTGCGGAGGATCTC
CACTGATTTAGTAATTAGCGTCTGAATAATTTATAAATCTTTTTCTTTTT
TTTAAAAAAAAGAAGCAAAGATGAGGGTAGAGAAGTCGCAGGTATGGCAG
CCGTGCAAAAAGAAGAGGTCTTGATCGTTAGTAAATAATCTCCAAAGCGA
GAGAGAAAAAATCGAAAATAAGAAGAGATTTTTAAATTATATTGAGGAAG
GGAAGGGAACGAAAACTGAATCTTAGGTTGAGCGAAGATTGAAGGGAAGG
ACATGGCTTCTCGCACAGGCGGAGCAAGCAGGACACGTGTTGGGAAGTAC
GAGTTAGGAAGGACGCTCGGAGAAGGAAGCTTCGCCAAAGTGGAGTTTGC
TAGAAACACTGAAACTGGAGAAAATGTCGCCATTAAAATTCTCGATAAAG
AAAAGGTTCTCAAGCATAAGATGATCGGTCAGATTAAGCGTGAAATTTCA
ACCATGAAACTTATTAGACACCCTAATGTCATCCGCATGTATGAGGTGAT
GGCAAGCAAGACAAAAATATACATTGTTTTGGAATTTGTGAC
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