CK934331

Overview
NameCK934331
Unique NameCK934331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1673 contig Csv1_Contig1673:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            RVG Y++ RTLG+G+FA V+ AR+  T   VAIKI+DK + L    + +I RE+  MKL+ HP++I++Y+VM +K  +YIV EF
Sbjct:   22 RVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDPSNLEKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEF 104          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 3
Query:  582 AKIEGKDMASRTGGASRT----RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            A+  G+   S    A R      VGKY+L +T+G+G+FAKV+ A++  TG  VAIKI+DK   L    + ++ RE+  MK + HPN++++Y+VM ++  +Y+VLE+
Sbjct:  144 ARSTGQSGMSSRSAARRNDQDVHVGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDK-TALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEY 248          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: CIPK7_ORYSJ (CBL-interacting protein kinase 7 OS=Oryza sativa subsp. japonica GN=CIPK7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 40/85 (47.06%), Postives = 63/85 (74.12%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGEN-VAIKILDKEKVLKHK--MIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            +GKYELGR LG G+FAKV  AR+   G + VA+K+LDK  +      M  ++ RE++ M+ +RHPNV+R++EV+A+++K+Y+V+E
Sbjct:   16 LGKYELGRLLGRGTFAKVYHARSLAPGADPVAVKVLDKPDLAAAGAGMATRVLREVAAMRRLRHPNVLRLHEVLATRSKVYLVME 100          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 35/93 (37.63%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  609 SRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            S T    +  +G Y L +T+G+G+FAKV+ AR+  TG+ VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   40 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 131          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 35/93 (37.63%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  609 SRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            S T    +  +G Y L +T+G+G+FAKV+ AR+  TG+ VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   40 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 131          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 35/93 (37.63%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  609 SRTGGASRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            S T    +  +G Y L +T+G+G+FAKV+ AR+  TG+ VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   40 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 131          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SNF1_SCHPO (SNF1-like protein kinase ssp2 OS=Schizosaccharomyces pombe GN=ssp2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.155e-14
Identity = 35/87 (40.23%), Postives = 62/87 (71.26%), Query Frame = 3
Query:  627 SRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            S+  +G Y +  TLGEGSF KV+ A + +T + VA+K + ++ + K  M  +++REIS +KL+RHP++I++Y+V+ + T I +V+E+
Sbjct:   27 SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 113          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.155e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEY 138          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.155e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEY 138          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.155e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VA+KI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+V+E+
Sbjct:   57 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEY 138          
The following BLAST results are available for this feature:
BLAST of CK934331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
SIK2_CHICK8.372e-1548.81Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
PAR1_CAEEL8.372e-1539.62Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
CIPK7_ORYSJ8.372e-1547.06CBL-interacting protein kinase 7 OS=Oryza sativa s... [more]
MARK2_RAT1.093e-1437.63Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_MOUSE1.093e-1437.63Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
MARK2_HUMAN1.093e-1437.63Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
SNF1_SCHPO4.155e-1440.23SNF1-like protein kinase ssp2 OS=Schizosaccharomyc... [more]
MARK1_RAT4.155e-1439.76Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE4.155e-1439.76Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
MARK1_HUMAN4.155e-1439.76Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_D02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934331 ID=CK934331; Name=CK934331; organism=Citrus sinensis; type=EST; length=892bp
GGGGATAATTAAAATTTTCTGACACCAAATACTTCGCCTACGATCCAGCT
CCCAAAATTTCTTCGCAAGAATCTCCTCAATAATTCACGTAGATGTACGT
CTCTGATTTATCTTCTCAGTGCAAGCCCCTTTATAGATCCGTGCGCTAAT
TAATTATTATGATTATTATTTCTTTATTCGACTGAAATTTGCGAGTAAAT
ACTTCGATTTTGCCAAAATCATAATTTACATCCTTTCTCGGCTGATTCAC
TCGATTCCATGGGGTCCATGTCTGATCTGTCGGTCACAATCTCTCATCGA
TTCGTCCTGAATTGTCGAGGTTTGAGTTTTTGAATTTTGCGGAGGATCTC
CACTGATTTAGTAATTAGCGTCTGAATAATTTATAAATCTTTTTCTTTTT
TTTAAAAAAAAGAAGCAAAGATGAGGGTAGAGAAGTCGCAGGTATGGCAG
CCGTGCAAAAAGAAGAGGTCTTGATCGTTAGTAAATAATCTCCAAAGCGA
GAGAGAAAAAATCGAAAATAAGAAGAGATTTTTAAATTATATTGAGGAAG
GGAAGGGAACGAAAACTGAATCTTAGGTTGAGCGAAGATTGAAGGGAAGG
ACATGGCTTCTCGCACAGGCGGAGCAAGCAGGACACGTGTTGGGAAGTAC
GAGTTAGGAAGGACGCTCGGAGAAGGAAGCTTCGCCAAAGTGGAGTTTGC
TAGAAACACTGAAACTGGAGAAAATGTCGCCATTAAAATTCTCGATAAAG
AAAAGGTTCTCAAGCATAAGATGATCGGTCAGATTAAGCGTGAAATTTCA
ACCATGAAACTTATTAGACACCCTAATGTCATCCGCATGTATGAGGTGAT
GGCAAGCAAGACAAAAATATACATTGTTTTGGAATTTGTGAC
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