CK934331

Overview
NameCK934331
Unique NameCK934331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1673 contig Csv1_Contig1673:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14
Identity = 39/84 (46.43%), Postives = 61/84 (72.62%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            RVG YE+ RT+G+G+FA V+ A +  T   VAIKI+DK + L  + + +I RE+  MK++RHP++IR+Y+VM ++  IY+V E+
Sbjct:   55 RVGYYEMERTIGKGNFAVVKLATHMITKAKVAIKIVDKTQ-LDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEY 137          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 36/83 (43.37%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            VG Y L RT+G+G+FAKV+ AR+  TG  VAIKI+DK + L    + ++ RE+  MK + HPN+++++EV+ ++  +Y+V+E+
Sbjct:   56 VGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEY 137          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 36/83 (43.37%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            VG Y L RT+G+G+FAKV+ AR+  TG  VAIKI+DK + L    + ++ RE+  MK + HPN+++++EV+ ++  +Y+V+E+
Sbjct:   56 VGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEY 137          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VAIKI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+++E+
Sbjct:   53 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 134          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VAIKI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+++E+
Sbjct:   53 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 134          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 33/83 (39.76%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  639 VGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            +G Y L +T+G+G+FAKV+ AR+  TG  VAIKI+DK + L    + ++ RE+  MK++ HPN+++++EV+ ++  +Y+++E+
Sbjct:   53 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 134          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 33/88 (37.50%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  627 SRTRVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFV 890
            ++ ++G Y L  TLG G+F KV+   +  T   VA+KIL+++K+    ++G+I+REI  + L RHP++IR+Y+V+++ + I++++E V
Sbjct:   80 AQIKIGHYILKETLGVGTFGKVKVGIHETTQYKVAVKILNRQKIKSLDVVGKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHV 167          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: HUNK_XENTR (Hormonally up-regulated neu tumor-associated kinase homolog OS=Xenopus tropicalis GN=hunk PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQ-IKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            RVG Y +GR LGEGSFAKV    +  TGE VAIK++DK+K  K   + + ++RE    ++IRHPN+ ++ +++ ++   Y+V+E
Sbjct:   51 RVGSYLIGRKLGEGSFAKVREGLHVGTGEKVAIKVIDKKKAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVME 134          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: HUNKA_XENLA (Hormonally up-regulated neu tumor-associated kinase homolog A OS=Xenopus laevis GN=hunk-A PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQ-IKREISTMKLIRHPNVIRMYEVMASKTKIYIVLE 884
            RVG Y +GR LGEGSFAKV    +  TGE VAIK++DK+K  K   + + ++RE    ++IRHPN+ ++ +++ ++   Y+V+E
Sbjct:   51 RVGSYLIGRKLGEGSFAKVREGLHVVTGEKVAIKVIDKKKAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVME 134          
BLAST of CK934331 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 37/84 (44.05%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  636 RVGKYELGRTLGEGSFAKVEFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEF 887
            R+G YE+ RT+G+G+FA V+ A +  T   VAIKI+DK + L  + + +I RE+  MK++ HP++IR+Y+VM ++  IY+V E+
Sbjct:    4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKSQ-LDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEY 86          
The following BLAST results are available for this feature:
BLAST of CK934331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
SIK3_DANRE5.427e-1446.43Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
MARK4_MOUSE9.256e-1443.37MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN9.256e-1443.37MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
MARK3_RAT9.256e-1439.76MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE9.256e-1439.76MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK3_HUMAN9.256e-1439.76MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
AAPK2_CAEEL1.579e-1337.505'-AMP-activated protein kinase catalytic subunit ... [more]
HUNK_XENTR2.062e-1342.86Hormonally up-regulated neu tumor-associated kinas... [more]
HUNKA_XENLA2.062e-1342.86Hormonally up-regulated neu tumor-associated kinas... [more]
SIK3_MOUSE3.517e-1344.05Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_D02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934331 ID=CK934331; Name=CK934331; organism=Citrus sinensis; type=EST; length=892bp
GGGGATAATTAAAATTTTCTGACACCAAATACTTCGCCTACGATCCAGCT
CCCAAAATTTCTTCGCAAGAATCTCCTCAATAATTCACGTAGATGTACGT
CTCTGATTTATCTTCTCAGTGCAAGCCCCTTTATAGATCCGTGCGCTAAT
TAATTATTATGATTATTATTTCTTTATTCGACTGAAATTTGCGAGTAAAT
ACTTCGATTTTGCCAAAATCATAATTTACATCCTTTCTCGGCTGATTCAC
TCGATTCCATGGGGTCCATGTCTGATCTGTCGGTCACAATCTCTCATCGA
TTCGTCCTGAATTGTCGAGGTTTGAGTTTTTGAATTTTGCGGAGGATCTC
CACTGATTTAGTAATTAGCGTCTGAATAATTTATAAATCTTTTTCTTTTT
TTTAAAAAAAAGAAGCAAAGATGAGGGTAGAGAAGTCGCAGGTATGGCAG
CCGTGCAAAAAGAAGAGGTCTTGATCGTTAGTAAATAATCTCCAAAGCGA
GAGAGAAAAAATCGAAAATAAGAAGAGATTTTTAAATTATATTGAGGAAG
GGAAGGGAACGAAAACTGAATCTTAGGTTGAGCGAAGATTGAAGGGAAGG
ACATGGCTTCTCGCACAGGCGGAGCAAGCAGGACACGTGTTGGGAAGTAC
GAGTTAGGAAGGACGCTCGGAGAAGGAAGCTTCGCCAAAGTGGAGTTTGC
TAGAAACACTGAAACTGGAGAAAATGTCGCCATTAAAATTCTCGATAAAG
AAAAGGTTCTCAAGCATAAGATGATCGGTCAGATTAAGCGTGAAATTTCA
ACCATGAAACTTATTAGACACCCTAATGTCATCCGCATGTATGAGGTGAT
GGCAAGCAAGACAAAAATATACATTGTTTTGGAATTTGTGAC
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