CK934339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 73/194 (37.63%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 252 RERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS--NASTFINESPPEIPVVTLPE---KFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 818 R R ++H LG G+ ADI W+NKK S +LG T +W LFE++EY IT +C I +L + + +WS +S I PP I + + E +F+ +IN + L +I+SG+D + + LW+LSVVGN+ + +TL YIVFV L T+P++YE+YE+++ K+ ++KK F+ KV+ K+ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFN-------KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKI 204
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30 Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 240 RLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 740 +LF R+R IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +L L++LFLWS +++ +N P +P + E E + LR +N+ L V +IA RD + + V L+LLS++G+ +F TL + +++ TVP YE+YED I Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.080e-28 Identity = 59/197 (29.95%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 228 SKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 818 S +RL GR+ +H +G GK AD+ LWR + +S GV+ +T W++FE +++ + ++ + + F+ + S F N +P + L E+ V A++ R ++N L + ++ G D + F V+ LWLLS +G++ + TL YI +L T+P +Y KY+ K+D + Y + DE V+ ++ Sbjct: 20 SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL 216
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 61/160 (38.12%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 264 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 743 +H LGAG AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW+ ++T +N P +P + +PE+F + A LR IN L++ +I R+ + L V LW +S VG N +TL YI +L + P++YEKY+D ID Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.463e-21 Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 264 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN-ASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPK 836 + +LG G AD+ LW++K S L AT W L E +E L+ L+C I +L + +LFLW+ F PP + P+ + AL + L +L EIA G+D K FL I + ++ +G++ + +T+ YI V T+PV+Y ++++ IDSF K + E VF K+V+S+IP+ Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVF-----KQVVSKIPR 186
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 49/172 (28.49%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 297 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLK 812 DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + +++ PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN +F T +I V+ TVP ++E+Y D+I + K Y EK+L+ Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE 189 The following BLAST results are available for this feature:
BLAST of CK934339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934339 ID=CK934339; Name=CK934339; organism=Citrus sinensis; type=EST; length=845bpback to top |