CK934340

Overview
NameCK934340
Unique NameCK934340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:7..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.714e-40
Identity = 87/210 (41.43%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   66 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 695
            +V +L  W S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K++   K +  + G E +E   ++LI     LE+        KPF+G    GF+D+    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.562e-37
Identity = 89/226 (39.38%), Postives = 130/226 (57.52%), Query Frame = 3
Query:   66 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLF-PALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYL------GWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 722
            +VK+LG W SPF  R  +ALK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DPY+R+ ARF+A  VDE++      S+  AD  + +E   EQ+ E ++ LE   V    GK +FGG  +GFLD   G  +      GW     + I ++++ E K P   +W         VKD +P  ++  E    +A+
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDPYERSKARFFAKLVDEQIMNVGFISMARAD-EKGREVLAEQVRELIMYLEKELV----GKDYFGGKTVGFLDFVAGSLIPFCLERGW-----EGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAE 219          
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.254e-36
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 3
Query:   63 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 704
            ++V +L    S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K++   + + S  G E +E A ++ IE    LE         K +FGG  +GF+D+A   +  W    E      +  E +   L  W +    +  V   +P   K+ +F
Sbjct:    4 NNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKG-EDQEEAKKEFIEIFKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECRKLVVW-QNCMENERVSKSLPHPHKIYDF 208          
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 88/229 (38.43%), Postives = 128/229 (55.90%), Query Frame = 3
Query:   66 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP-------SDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFF---GGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 722
            ++ +L  W SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP          Y RA ARFWA YVD KL+     +    G E + AA  ++ E L  LE         + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+ +F  VL K
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKG-EPQAAAGREMAEILRTLEAEL----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKK 226          
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 86/228 (37.72%), Postives = 128/228 (56.14%), Query Frame = 3
Query:   66 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD------PYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFF---GGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 722
            ++ +L  W SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++       Y RA ARFWA YVD KL+     +    G E + AA  ++ E L  LE         + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+ +F  VL K
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKG-EPQAAAGREMAEILRTLEAEL----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKK 226          
BLAST of CK934340 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 64/200 (32.00%), Postives = 97/200 (48.50%), Query Frame = 3
Query:   96 PFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKS-IGSADGAEAKE---AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEV-KTPGLFKWAERFCADAAVKDVM 677
            PF  R R+ LK K + +E +  NL +K E   K NP    +PVL ++  + + ES I  EY+DEA+   G  +LP DPY++A  +        +LF  + S +GS   ++ KE      E+  +    LE+  V  +K   FFGG+ I  +D     YL W    E++  +KL + V  TP L  W      D  V  ++
Sbjct:   33 PFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAY--PGKKLLPDDPYEKACQKMIL-----ELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEE--VLTNKKTTFFGGNSISMID-----YLIWPWF-ERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 216          
The following BLAST results are available for this feature:
BLAST of CK934340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTX3_SOYBN3.714e-4041.43Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_ARATH8.562e-3739.38Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_NICPL3.254e-3641.12Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ1.415e-3138.43Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.415e-3137.72Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTO1_HUMAN8.070e-1132.00Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934340 ID=CK934340; Name=CK934340; organism=Citrus sinensis; type=EST; length=800bp
GGGGATTTCATTTCAGTTGCGAGAGCAGAGCTTAGAGAAAAAAAAAAAAG
AAAATGGCAAAAAGCGACGTGAAGGTTTTGGGTGCGTGGCCAAGCCCATT
TGTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGT
TTCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAAC
CCTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTG
CGAATCTCTCATCATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAG
GTCCCTCTATTCTTCCTTCTGATCCTTATGACCGTGCCGTTGCTCGTTTC
TGGGCCGCTTATGTTGATGAGAAGTTGTTCCCTGCCTTGAAAAGCATTGG
TAGTGCAGATGGAGCGGAAGCTAAGGAAGCTGCGATTGAGCAATTGATTG
AAGGCTTGGTTTTGCTGGAGGATGCTTTTGTTAAGTGTAGCAAAGGGAAG
CCTTTCTTTGGTGGAAGCCAAATTGGGTTTCTTGACATTGCATTTGGTTG
CTACTTGGGATGGGTGAGAGTGACAGAGAAAATGATTGAGGTGAAGCTCC
TTGATGAAGTCAAAACTCCTGGACTGTTCAAATGGGCTGAGAGATTCTGT
GCTGATGCCGCTGTCAAAGATGTTATGCCTGAGACTGATAAGCTTGCAGA
GTTTGCTAAGGTTCTTGCCAAACTCAGAGCTTCTGGCAAATGGAATTAAG
AAGCTTAATCCTGTGCTTGGAGGGGCACAAAAAACAAGATAAAAAAAAAA
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