CK934342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.056e-28 Identity = 62/101 (61.39%), Postives = 76/101 (75.25%), Query Frame = 3 Query: 555 GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRAL 857 G S G +RKKL+L+K+QS +LE+SF+ HN L+ L+PRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE+LTEEN++L+ E+ ELR L Sbjct: 103 GGSGGGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRL 203
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25 Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 495 KRSEREPNGDELEMERACS-----RGISDDEDGD-------------TSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 +R E E R+C RG DD+DGD SRKKLRL+ +Q+ +LE+SF+ HN L+ GL RQVEVWFQNRRARTKLKQTE DC+ L+R C++L +N RL++++ ELR SP Sbjct: 67 QRGEAEAEATTTRQRRSCKKGRRGRGDDDDDDGDRRSPSGGGGDEEGASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRRSSSSP 209
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24 Identity = 59/101 (58.42%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 564 DDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866 D G RKKLRL+K+QS +LEESF +++TL P L RQVEVWFQNRRAR+KLK TE++CE+LKR +L E+NRRLQ EV+ELRALK S Sbjct: 60 DSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPS 160
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 567 DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 D+ KK RL+ +Q LE+ F+ N L GL+PRQ+ +WFQNRRAR+K KQ E D + LKR E+L +EN LQ + Q+L+A Sbjct: 63 DDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQA 158
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 3 Query: 492 GKRSERE-----PNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 GKRS E G+ + E S D+ KK RL+ +Q LE++F+ N L P GL+PRQ+ +WFQNRRAR K KQ E D + LKR + L EN LQ Q+L+A Sbjct: 52 GKRSPMEGCCDLETGNNMNGEEDYS-----DDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQA 172
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 41/98 (41.84%), Postives = 52/98 (53.06%), Query Frame = 3 Query: 573 DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866 D KK RL+ +Q +LE SF+E N L P G+ PRQV VWFQNRRAR K KQ E D + LK + L ++ L + LRA +S Sbjct: 80 DEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVIS 177
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 41/98 (41.84%), Postives = 52/98 (53.06%), Query Frame = 3 Query: 573 DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866 D KK RL+ +Q +LE SF+E N L P G+ PRQV VWFQNRRAR K KQ E D + LK + L ++ L + LRA +S Sbjct: 80 DEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVIS 177
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 3 Query: 573 DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ENLTEENRRLQKEVQEL 848 D KK RL+ +Q +LE SF+E N L P GL+PRQV VWFQNRRAR K KQ E D + LK + L ++N RL +V L Sbjct: 71 DEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 169
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 3 Query: 573 DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ENLTEENRRLQKEVQEL 848 D KK RL+ +Q +LE SF+E N L P GL+PRQV VWFQNRRAR K KQ E D + LK + L ++N RL +V L Sbjct: 73 DEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 171
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 567 DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 D+ KK RL+ +Q LE++F+ N L P GL+PRQV +WFQNRRAR K KQ E D + LKR + + EN L ++L+A Sbjct: 122 DDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQA 217 The following BLAST results are available for this feature:
BLAST of CK934342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934342 ID=CK934342; Name=CK934342; organism=Citrus sinensis; type=EST; length=890bpback to top |