CK934346

Overview
NameCK934346
Unique NameCK934346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934346 vs. ExPASy Swiss-Prot
Match: RL31_SCHPO (60S ribosomal protein L31 OS=Schizosaccharomyces pombe GN=rpl31 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 3 
Query:   81 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDE 419
            K    +VVTR+YTI++HKRL+G +FKK+AP+AIKEI  FAQK M T +VRVD  LNK+VW                   +DE+D  +  Y+ V   ++    ++   T V++E
Sbjct:    6 KSAINQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGIRNVPHRLRLRLSRKRSDEDD--KALYTYVQAVDVANPKME---TTVVEE 113
The following BLAST results are available for this feature:
BLAST of CK934346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_SCHPO2.305e-1540.7160S ribosomal protein L31 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_B07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934346 ID=CK934346; Name=CK934346; organism=Citrus sinensis; type=EST; length=670bp
GGGGAGCAGCCGCAGACGCAGAGTGTAGAAGCTCGAGAGCAGAAAAAGAA
GAAGCAACAACAATGGTGGAGAAAGCTGGTAAAGGAAGAAAAGAAGAGGT
CGTCACTCGCGAATATACCATTAATCTCCACAAACGCTTGCATGGCTGCA
CCTTCAAGAAGAAAGCTCCAAAAGCCATAAAGGAAATTAGGAAGTTTGCT
CAAAAAGCCATGGGGACAACTGATGTTAGGGTGGATGTGAAGCTCAACAA
GCAAGTGTGGAGCCGTGGTATCCGTAGTGTACCAAGGAGAATTCGTGTTC
GTGTTGCACGGAAGAGAAACGATGAGGAAGATGCCAAAGAAGAGTTCTAC
TCTCTCGTCACTGTTGCCGAGATCCCTCCAGAAGGACTCAAGGGGCTGGG
CACCAAGGTCATTGATGAGGAAGATTGAAGCAACCTTTCTGTTTAGCTAA
GGAACTCCAAATTTTGGCTATAATTTTATCTTATTTAGTTGCTTTTTTGG
TTTTGGATTTACTTTTTAGAACTGCCTTGGGCCAAAAAAGGTTTCGTGAA
CGTATTGTGATTTATGCATTTACCCTGTTTAAGAAAAAAAAAAAAAAAGC
AAAAAGACAAAAAAAAAAACAAAAACCCAAAAAAAANNNNNNCCAAAAAA
NNNNAAAAAAAAAAAAAAAA
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