CK934347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 DVVIV R+A+ K K G F++ AD L A +++A++ + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM 125
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 DVVIV R+A+ K K G F++ AD L A +++A++ + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM 125
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 DVVIV R+A+ K K G F++ AD L A +++A++ + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM 125
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 248 ICKGKR-------GGFKDTLADDLLA-PVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571 IC G R G ADDL A P+ + ++ RL+ + D+++G G RMA AG P++V T+NR C SGL A+ A AIKAG D+ IA G+ESM+ Sbjct: 6 ICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMS 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 2 Query: 212 DDVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 ++VVI+ A RT + + K G F+ A+DL A +++ V+ + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G + + G+E M Sbjct: 2 ENVVIIDAVRTPMGRSKGGAFRQVRAEDLSAHLMREVLSRNPELNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAQVSLIGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 +VV+V RT + + K G F+ T A+DL A ++K ++ + ++NPSE+ DI G V R AA AG P + TVNR C S +QA+ D AI G +I + G+E M Sbjct: 7 NVVVVDCLRTPMGRSKGGAFRHTRAEDLSAHLMKGILARNPQVNPSEIEDIYWGCVQQTLEQGFNIARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGTRAIMTGDAEICLIGGVEHM 125
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 +VVIV RT + + K G F+ T A+DL A ++K ++++ ++P+++ DI G V R +A AG P+++ TVNR C S +QA+ D + AI G +I I G+E M Sbjct: 3 NVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ V+E+ ++++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAE 156
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 2 Query: 212 DDVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 + VVIV A RT + + K G F+ A+DL A ++++++ + T L+ E+ DI G V R AA A P +VP TVNR C S +QA+ D A AI G ++ + G+E M Sbjct: 2 EKVVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNTALDAREIDDIYWGCVQQALEQGFNVARNAALLAEIPVSVPATTVNRLCGSSMQALHDAARAIMVGDANVCLIGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGG-FKDTLADDLLAPVLKAVIEKTRLNPS----EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571 DV I A RT I G+ GG ADDL A LKA+IE NP+ +V ++ G G RMA AG PE++P T+NR C+SG+ A+ AI +G ++ IA G+ESM+ Sbjct: 3 DVFICDAIRTPI--GRFGGALAGVRADDLAAVPLKALIEP---NPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMS 121 The following BLAST results are available for this feature:
BLAST of CK934347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934347 ID=CK934347; Name=CK934347; organism=Citrus sinensis; type=EST; length=682bpback to top |