CK934347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 218 VVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 VVIV RT + + K G F+ A+DL A ++K ++ + ++NP E+ DI G V R AA AG P + TVNR C S +QA+ D A AI G +I + G+E M Sbjct: 4 VVIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 218 VVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 VVIV RT + + K G F+ A+DL A ++K ++ + ++NP E+ DI G V R AA AG P + TVNR C S +QA+ D A AI G +I + G+E M Sbjct: 4 VVIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 48/152 (31.58%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ ++E+ T+++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAE 156
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKIDPKEVEDVIWGCVNQTMEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAE 156
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: THIL_MYCTU (Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis GN=fadA4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 221 VIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571 +IVA RT I K G KD A +L A +K +EK + S V +++G VL G+ + M R AA AG VP T+N+ C SG+ A+A I+A +D+ +A G ESMT Sbjct: 1 MIVAGARTPIGK-LMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQ-MPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMT 115
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: THIL_MYCBO (Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis GN=fadA4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 221 VIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571 +IVA RT I K G KD A +L A +K +EK + S V +++G VL G+ + M R AA AG VP T+N+ C SG+ A+A I+A +D+ +A G ESMT Sbjct: 1 MIVAGARTPIGK-LMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQ-MPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMT 115
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568 +VVIV RT + + K G F+ T A+DL A ++K ++++ ++P+++ DI G V R +A AG P+++ TVNR C S +QA+ D + AI G +I I G+E M Sbjct: 3 NVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHM 121
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAE 156
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAE 156
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667 DVVIV RT + + K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAE 156 The following BLAST results are available for this feature:
BLAST of CK934347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934347 ID=CK934347; Name=CK934347; organism=Citrus sinensis; type=EST; length=682bpback to top |