CK934347

Overview
NameCK934347
Unique NameCK934347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  212 DDVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFT-QARDCLLP-----------MGITSENVA 676
            ++VVIV+A RT I     G      A DL A V++  I++  +  + V ++++G VL  G  +    R AA  AG  + +P  T+N+ C SGL++VA  A +I +G  DI +  G+E+M+     +  +V   V++     RD ++            MGIT+EN+A
Sbjct:    2 ENVVIVSAVRTPI-GSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQN-PARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQSIISGDADIVVVGGMENMSQAPYLLDSKVRQGVKMGNLTLRDTMIEDGLTCASNHYHMGITAENIA 166          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 2
Query:  215 DVVIVAAYRTAICKGKRGGFKDTL-ADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571
            +V I  A RT I  G+ GG    + ADDL A  LKA++E+   ++ S + ++ +G     G       RMA   AG PE+VP  T+NR C+SG+ A+     AI  G  ++ IA G+ESM+
Sbjct:    4 EVFICDAVRTPI--GRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMS 122          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667
            DVVIV   RT + + K G  ++T A+D+ A ++  ++E+  +++P EV D++ G V           RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M    +S++  V+P   +   A      MG+T+E
Sbjct:    7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAE 156          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  212 DDVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568
            + VVIV A RT + + K G F+   A+DL A ++++++ +   L+  E+ DI  G V           R AA  A  P  VP  TVNR C S +QA+ D A  I  G  D+ +  G+E M
Sbjct:    2 EKVVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNAALDAREIDDIYWGCVQQTLEQGFNVARNAALLAEIPMNVPATTVNRLCGSSMQALHDAARTIMVGDADVCLIGGVEHM 121          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 667
            DVVIV   RT + + K G  ++T A+D+ A ++  ++E+  +++P+EV D++ G V           RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M    +S++  V+P   +   A      MG+T+E
Sbjct:    7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAE 156          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  215 DVVIVAAYRTAICKGKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 568
            DVVIV   R+A+ K K G F++  AD L A +++A++ + + + +EV D++ G V           R     A  P+TV  +TVNR C S +QA+   A  I     DI I  G+E M
Sbjct:    8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIVLLADLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM 125          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 2
Query:  215 DVVIVAAYRTAICKGKRGGFKDTL-ADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571
            +V I  A RT I  G+ GG    + ADDL A  +KA++E+  +++ S++ ++ +G     G       RMA   AG P++VP  T+NR C+SG+ AV     AI +G  ++ IA G+ESM+
Sbjct:    4 EVYICDAVRTPI--GRFGGSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMS 122          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 46/132 (34.85%), Postives = 69/132 (52.27%), Query Frame = 2
Query:  188 YHRKPAFDDDVVIVAAYRTAICKGKRGGFKDTLADD----LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571
            Y  KP  +D VVIV+A RT I     G F  +LA      L    ++  IEK  +   EV ++ +G V+  G  +A   R A   AG P   P  TVN+ C+SG++A+   + ++  G  D+ +A G+ESM+
Sbjct:   30 YASKPTLND-VVIVSATRTPI-----GSFLGSLASQPATKLGTIAIQGAIEKAGIPKEEVKEVYMGNVIQGGEGQA-PTRQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 154          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: THIL_MOUSE (Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 2
Query:  188 YHRKPAFDDDVVIVAAYRTAICKGKRGGFKDTLADD----LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571
            Y  KP  ++ VVIV+A RT I     G F  +LA      L    ++  IEK  +   EV ++ +G V+  G  +A   R A   AG P + P  TVN+ C+SG++A+   + ++  G  D+ +A G+ESM+
Sbjct:   30 YASKPTLNE-VVIVSAIRTPI-----GSFLGSLASQPATKLGTAAIQGAIEKAGIPKEEVKEVYMGNVIQGGEGQA-PTRQATLGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 154          
BLAST of CK934347 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  188 YHRKPAFDDDVVIVAAYRTAICKGKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 571
            Y  +P+ ++ VVIV+A RT I     G FK +L    A  L +  +K  I+K  +   EV ++ +G VL  G  +A   R A   AG P + P  T+N+ C+SG++++   + ++  G  D+ +A G+ESM+
Sbjct:   26 YSTRPSLNE-VVIVSAVRTPI-----GSFKGSLSTLPATKLGSIAIKGAIDKAGIPVEEVKEVYMGNVLQAGEGQA-PTRQALLGAGLPLSTPATTINKVCASGMKSIMLASQSLMCGHQDVMVAGGMESMS 150          
The following BLAST results are available for this feature:
BLAST of CK934347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ATOB_HAEIN1.617e-1131.74Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
PCAF_PSEAE2.112e-1138.02Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aerugi... [more]
FADA_PSEPU2.112e-1130.923-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=f... [more]
FADA_PECCP3.602e-1135.833-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]
FADA_PSEF54.704e-1130.923-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_ACIAD4.704e-1135.593-ketoacyl-CoA thiolase OS=Acinetobacter sp. (stra... [more]
PCAF_PSESB6.144e-1137.19Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (s... [more]
THIL_RAT8.024e-1134.85Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]
THIL_MOUSE8.024e-1134.09Acetyl-CoA acetyltransferase, mitochondrial OS=Mus... [more]
THIL_DANRE8.024e-1133.33Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_B08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934347 ID=CK934347; Name=CK934347; organism=Citrus sinensis; type=EST; length=682bp
CAAGTCATCCNNNGGTTCTCGATTCATCAGAACTCAAAAGCTTTCCATTG
ACACCTGAGAGTGAGAGATGGAGAAAGCTCTTCACAGACAGAGAATTCTG
CTTCAACATCTTCAACCTTCTTCTTCCCAAACCAGTGACTCGCCGGCTAT
TTCTGCTTCGATTTGTTCGGCTGGTGAGGCTGCAGGGTACCATAGGAAGC
CTGCTTTTGATGATGATGTCGTCATTGTGGCTGCATACCGTACTGCAATT
TGCAAGGGGAAACGGGGAGGCTTCAAGGATACTCTTGCCGATGATCTGCT
TGCACCTGTTCTAAAGGCAGTGATAGAGAAAACGAGGTTGAATCCCAGTG
AAGTAGGGGATATAGTTGTTGGTACAGTCTTGGCACCCGGCTCAACAAGA
GCCATGGAGTGTAGGATGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGT
GCCCCTCAGAACTGTCAACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTG
CTGATGTTGCAACAGCTATAAAAGCTGGATTGTATGACATTGGTATTGCT
GCTGGATTGGAAAGCATGACAGTGAATTCTATTAGCGTTGTTGGCCAAGT
TAACCCCAAAGTGGAGATCTTTACTCAAGCTCGGGACTGTCTGCTTCCTA
TGGGTATCACTTCTGAAAATGTTGCACANNGA
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