CK934348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934348 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14 Identity = 66/187 (35.29%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 91 LQPYTEVFGLQRFRECELIHGRWVMLATLGALTVEWLTGI-------TWQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIGYIEFQRNSE------LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTILDTFIS*ISG 600 L Y E F + RE E+IH R M A LG + E L+ + W AG EG YLG P +++ I +V+++G +E R + DP LYPG FD LGLA D E A L++ E+K+ RLAM + GF VQA+V+ K L N A HL ++ L + + G Sbjct: 88 LSAYPETFA--KNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDP---LYPGS--FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of CK934348 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 56/156 (35.90%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 121 QRFRECELIHGRWVMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRN-SELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTILDTFI 585 +R R E+ HGR MLA +GAL ++L W +A + ++ +G + I G E R E +YPG FDPL L D K+A EIK+ RLA+ A LGF VQ V G PL N A HL PL I D+ + Sbjct: 38 ERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYEAAQ------NAGIG-------LKEVAIFTAAYGVFEVARGVKENSDPTTIYPG---FDPLNLTTDYTKEA-----EIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIADSIM 172 HSP 2 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 124 RFRECELIHGRWVMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTI 570 R R E+ HGR ML T+G + E L W +AG + V+G + + T W G +Q+ ELD R YPG FDPL L D + A E+K+ RLA+ A G Q + TG+ PL N + HL++P+ I Sbjct: 224 RMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAG--DSVDGLKLGFITMAIAAPTEYWRGQ---GGFNWQKG-ELD---RSYPG---FDPLNLTTDYTRAA-----EVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANI 355
BLAST of CK934348 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 56/171 (32.75%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 118 LQRFRECELIHGRWVMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR-----------------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTILDT 579 L+ F + ++++GRW ML G L E LT AG + E G+ F+ ++ + Y+E +R + L P + YPG + F+PL A K+ E+ + RLAM+AFLGF VQ V GKGP N HL+DP H TI+ T Sbjct: 68 LRWFVQADVVNGRWAMLGVAGMLIPEVLT-----KAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPG-RVFNPLNFAPLENKEK-----ELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQT 227 The following BLAST results are available for this feature:
BLAST of CK934348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934348 ID=CK934348; Name=CK934348; organism=Citrus sinensis; type=EST; length=785bpback to top |