CK934352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B4_CAEEL (Probable histone H2B 4 OS=Caenorhabditis elegans GN=his-48 PE=2 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTK 118
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B3_CAEEL (Probable histone H2B 3 OS=Caenorhabditis elegans GN=his-41 PE=2 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTK 118
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B1A_RAT (Histone H2B type 1-A OS=Rattus norvegicus GN=Hist1h2ba PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 37 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B_OLILU (Histone H2B OS=Olisthodiscus luteus PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 180 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 VETY YI+KVLKQVHPD GIS + M IMNSFINDIFE+LA E+SRLARYNK+ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 24 VETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTK 110
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2BL4_STRPU (Late histone H2B.L4 (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 69/86 (80.23%), Postives = 81/86 (94.19%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A E+SRLA+YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 17 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTK 102
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2BL2_PSAMI (Late histone H2B.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 69/86 (80.23%), Postives = 81/86 (94.19%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A E+SRL++YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLSQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTK 119
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2BL1_STRPU (Late histone H2B.L1 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A E+SRLA YNKK TITSRE+QT VRL+LPGELAKHAVSEGTKAVTK Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAAEASRLAHYNKKSTITSREVQTVVRLLLPGELAKHAVSEGTKAVTK 118
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B2_CAEEL (Histone H2B 2 OS=Caenorhabditis elegans GN=his-4 PE=1 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTK 118
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2B1_CAEEL (Histone H2B 1 OS=Caenorhabditis elegans GN=his-11 PE=1 SV=4) HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTK 117
BLAST of CK934352 vs. ExPASy Swiss-Prot
Match: H2BE1_PSAMI (Histone H2B.1, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.967e-33 Identity = 69/86 (80.23%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 183 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 440 E+Y IYI+KVLKQVHPD G+SS+AM IMNSF+NDIFE++A E+SRL +YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK Sbjct: 33 ESYGIYIYKVLKQVHPDTGVSSRAMTIMNSFVNDIFERIAGEASRLTQYNKKSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 118 The following BLAST results are available for this feature:
BLAST of CK934352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934352 ID=CK934352; Name=CK934352; organism=Citrus sinensis; type=EST; length=649bpback to top |