CK934377

Overview
NameCK934377
Unique NameCK934377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25
Identity = 73/208 (35.10%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  156 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPG-LVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            L   FY  +CP   +I++E +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  E+    LP     +  +   F   G+D P  LVAL G H+ G   C  ++ RLY        DP LN  ++  +   C
Sbjct:   32 LTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLC 239          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 68/186 (36.56%), Postives = 95/186 (51.08%), Query Frame = 3
Query:  156 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSVG*THCVKLVHRLYPEVD 713
            L   FY  +CP A   I+  V    ++      S LR  FHDC V+ CDASLLL+ T    S+   + +   R F  + +IK  VE  CPG+VSCADIL ++ RDGVVALGGP   +  GRRD   S A      LP     +  +L  +    ++   +VAL G+H++G   C      +Y + +
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGP-NLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN 214          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25
Identity = 72/210 (34.29%), Postives = 110/210 (52.38%), Query Frame = 3
Query:  156 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            L  NFY ++CP  E I+K+ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG  S A  +   LP  N+ ++ + + FA   +    ++AL  +H++G  HC K+ +R+Y       VDP LN  +   +   C
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLAC 236          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25
Identity = 70/205 (34.15%), Postives = 109/205 (53.17%), Query Frame = 3
Query:  165 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPG-LVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K ++ER CP  VSCAD+L ++ +  V+  GGP+ P+  GRRD  ++  ++    LP     ++ + + FA  G++ P  LVAL G H+ G   C  +  RLY        DP L+P ++  +   C
Sbjct:   34 DFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALC 238          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25
Identity = 73/202 (36.14%), Postives = 97/202 (48.02%), Query Frame = 3
Query:  168 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            +Y   C   E I++  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DGR S A      LP   D ++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +C
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQC 234          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24
Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  156 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSVG*THCVKLVHRLYPEVDPALNPD 731
            L   FY  TCP    I++  +    +         +R  FHDC V  CD S+LLD T  T +EK+   + G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   + ++V++ +F   G+D   LVAL G+H+ G   C     RL+   + + NPD
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPD 213          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  150 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVERECPG-VVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK--SRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSV 662
            PGL  +FYK +CP+AE I++  V+   +R    A   LR  FHDC VQ CDAS+LLD +     E++   +  +R   F+ I +I + + +EC G VVSC+D+L L+ RD VV  GGP   +  GRRD     ++ ++L   LP     +  +L   +   +DA  LVAL G H++
Sbjct:   39 PGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSG-LPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.841e-24
Identity = 72/208 (34.62%), Postives = 102/208 (49.04%), Query Frame = 3
Query:  156 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPG-LVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            L   FY +TCP    I+++ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCADIL ++ +  V   GGP   +  GRRD  ++   +    LP     +  +   F   G+D P  LVAL G H+ G   C  ++ RLY        DP LN  ++  +  +C
Sbjct:   31 LTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQC 238          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3
Query:  162 MNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGIDAPGLVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            + FY + C   E I++  V+   +     A   LR  FHDC V  CD S+LL       SE+    +  +R F  IE  K  +E+ CP  VSCADIL L+ RD VV  GG    +  GR DGR S+A   +  LP  +D ++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +C
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNT---SERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQC 237          
BLAST of CK934377 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 69/211 (32.70%), Postives = 105/211 (49.76%), Query Frame = 3
Query:  147 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDGMSVVLERFAAXGID-APGLVALLGSHSVG*THCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 758
            D  L   FY ++CP   +I+++ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP     +  + + F   G++ +  LVAL G H+ G   C  ++ RLY        DP LN  ++  +   C
Sbjct:   29 DAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLC 239          
The following BLAST results are available for this feature:
BLAST of CK934377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER34_ARATH3.097e-2535.10Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER66_MAIZE4.045e-2536.56Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER73_ARATH5.283e-2534.29Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER3_ARMRU5.283e-2534.15Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER70_ARATH6.900e-2536.14Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PERX_TOBAC1.177e-2434.90Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1_SORBI2.622e-2438.07Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER32_ARATH5.841e-2434.62Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER69_ARATH1.301e-2334.80Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER1A_ARMRU1.301e-2332.70Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_H06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934377 ID=CK934377; Name=CK934377; organism=Citrus sinensis; type=EST; length=758bp
GGGAAGAGAGATCTAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTA
GAAGAGAAAATGGGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTATC
CTTCTCAGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACC
CAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGAC
ATTATCAAGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGC
ATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTG
ATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAG
ATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAA
AGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTC
TTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATT
CCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACT
TGAGCAGTATCTCCCAGATCACAACGACGGCATGTCTGTTGTTCTTGAGA
GGTTTGCAGCNNNTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGA
TCTCACAGTGTTGGCTGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTA
CCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCC
ATAAGTGT
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