CK934379

Overview
NameCK934379
Unique NameCK934379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934379 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.275e-14
Identity = 78/263 (29.66%), Postives = 123/263 (46.77%), Query Frame = 3 
Query:   66 VCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTDASHLFSLPGATKLNVRVY----EANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG---VRRVVLTSSISSIVPNPNWPQGKVI-DETSWTDL--DFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDV----VAIHPATSLGP--FPQP---YVNASGAVLQRLLQGSKDTXEHCWLGA-VHVKDVAKAQVLLFETSAASGRYL 791
            V V+GA+GFI   ++  LL++ Y  I        +A  L        L + +       N  D     R  E  + V H ASP   D   + EK+LLIPA++GT N+L + KK+    V RVV+TSS ++I+         V+  E SW +   + C+   I  Y  SK  AEKAAWEF ++N   +      ++P+   GP  F +    ++N S  ++  L+    +     +    + V+DVA A +  F+    +G+ L
Sbjct:    5 VLVSGASGFIALHILSQLLKQDYKVIGTVRSHEKEAKLLRQFQHNPNLTLEIVPDISHPNAFDKVLQKRGRE-IRYVLHTASPFHYDTT-EYEKDLLIPALEGTKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGPQLFDEDVHGHLNTSCEMINGLIHTPVNASVPDFHSIFIDVRDVALAHLYAFQKENTAGKRL 265
The following BLAST results are available for this feature:
BLAST of CK934379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
YD541_YEAST1.275e-1429.66Putative uncharacterized oxidoreductase YDR541C OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_F11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934379 ID=CK934379; Name=CK934379; organism=Citrus sinensis; type=EST; length=829bp
GGGGACTTCACAAAATCGTCACATAATTAAAGAGAAAAAGGATGAACGGG
CCAGAAAAGGAAGTAGTTTGCGTGACTGGAGCCAACGGGTTCATCGGAAC
ATGGGTGGTCCGAACCCTTCTAGAAAAAGGCTACACCAACATTCACGCTG
CCATCTTTCCCGGCACTGACGCATCCCACTTGTTCAGCCTCCCAGGCGCC
ACCAAGCTCAACGTCCGTGTTTACGAGGCCAATATCTTAGACAACGAAGC
AATTTCCAGGGCCATCGAGGGTTGCAAGGGGGTCTTCCATCTTGCCTCTC
CTAACACCCTGGATGATCCCAAGGACCCCGAAAAGGAGCTGCTCATTCCT
GCTGTTCAAGGCACCCTCAATGTCTTAGAGGCTGCCAAGAAGTTTGGTGT
CAGGCGTGTGGTGCTCACCAGCTCCATTTCTTCCATTGTGCCTAATCCCA
ATTGGCCTCAAGGCAAGGTCATTGATGAAACTTCTTGGACCGACCTTGAC
TTTTGCAAGTCTCACAAGATATGGTATTCAATGTCAAAGACACTAGCAGA
AAAAGCAGCATGGGAATTTGCAGAGAAGAATGGAACGGATGTGGTGGCAA
TCCATCCAGCCACATCTCTTGGGCCATTTCCGCAGCCTTACGTGAACGCG
AGCGGAGCTGTGCTGCAGCGTTTGTTGCAGGGTTCAAAAGACACTNNNGA
GCATTGCTGGCTGGGAGCTGTGCATGTTAAAGATGTGGCTAAGGCTCAAG
TGTTGCTTTTTGAAACTTCTGCTGCTTCTGGTAGATACCTCTGTACCNAC
GGAATTTATCAGTTTGCTGATTTTGCNNA
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