CK934380

Overview
NameCK934380
Unique NameCK934380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: ANKR1_MOUSE (Ankyrin repeat domain-containing protein 1 OS=Mus musculus GN=Ankrd1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 50/145 (34.48%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  117 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALD 551
            D    TALH A  +GH+ +V+ L+E G+ +         TA+H A R G+ +++K LL+K   I  R DK   TALH+AV+    E  + L+  E   +N  D +G++ LH A R  R ++++ L+   G D  V N + +T +D
Sbjct:  150 DEYKRTALHRACLEGHLAIVEKLMEAGAQI-EFRDMLESTAIHWACRGGNADVLKLLLNKGAKISAR-DKLLSTALHVAVRTGHYECAEHLIACE-ADLNAKDREGDTPLHDAVRLNRYKMIRLLMTF-GADLKVKNCAGKTPMD 290          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: MIB_DROME (E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster GN=mib1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 71/254 (27.95%), Postives = 114/254 (44.88%), Query Frame = 3
Query:    9 IKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVE-PVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIKPQANSARELKQAVSDIKHEVHDQLEHTRETR---KHVHGIAKRINK 758
            I+ ++G  A H AA      V++IL +A  +L    +    T+LH A ++GH+ VVK LL  G    ++  S G T LH A    H E++  LL     I L N+       H A+KG    +   L K   P I+      G +ALH+A     V+I + L+++   +    N + +TAL  A +  H +I  +L + G        P  +    L +A   ++H    QL+  ++     K + G+    NK
Sbjct:  596 IEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNAR-NKRRQTSLHIAVNKGHLNVVKTLLTLGCH-PSLQDSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHLAALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLLVQDGADLN---IPDKDGDTPLHEA---LRHHTLSQLKQLQDVEGFGKLLMGLRNANNK 841          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: INVS_CHICK (Inversin OS=Gallus gallus GN=INVS PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 3
Query:   24 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVE-PVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEI 581
            G    H A   G + V+ +L       + ++D+   T LH A+  GH ++V  LLE+       + S G T LH AA++   E V+  L K P +   +D +G+T+   A    S  ++  ++ ++  + INM D    +ALH A   G V  V+ LL  N    A ++  + T L  A + GH E+
Sbjct:  221 GRTPLHFAVADGNVAVVDVLTSYEGCNVTSYDNLFRTPLHWAALLGHAQIVHLLLERNKFGTIPSDSQGATPLHYAAQSNFAETVEVFL-KHPSVKDDSDLEGRTSFMWAAGKGSDNVIRTMLDLKLDIDINMTDKYAGTALHAAALSGHVSTVKLLLERNAQVDA-LDVMKHTPLFRACEMGHKEV 405          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: ANS1A_MOUSE (Ankyrin repeat and SAM domain-containing protein 1A OS=Mus musculus GN=Anks1a PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 71/280 (25.36%), Postives = 121/280 (43.21%), Query Frame = 3
Query:   24 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNG-----------------------KTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIKPQANSARELKQAVSDIKHEVHDQLEHTRETRKHVHGIAKRINKMHTEGLNXXXNS 794
            GY   H AA  G  +V+++L+     L    DS     LH A+ +G  ++V+ L+++G +   +   N                        +TALH AA+ GH E+VKALL +     +RN+ K +T L +A     +E+V  L+   P +++    K ++ LH+A R G   +VQ LL+  G+D +       +AL  A   G +++  IL   G+     +  + N        V D+  +   Q+    E         K +++  T  L    N+
Sbjct:   76 GYTPLHHAALNGHRDVVEVLLRN-DALTNVADSKGCYPLHLAAWKGDAQIVRLLIQQGPSHTRVNEQNALEIRELKKYGPFDPYINAKNNDNETALHCAAQYGHTEVVKALLEELTDPTMRNN-KFETPLDLAALYGRLEVVKLLLGAHPNLLSCSTRK-HTPLHLAARNGHKAVVQVLLDA-GMD-SNYQTEMGSALHEAALFGKTDVVQILLAAGI----DVNIKDNRGLTALDTVRDLPSQKSQQIAALIEDHMTGKRSVKEVDRTSTAQLPLLSNT 346          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: LATA_LATTR (Alpha-latrotoxin-Lt1a OS=Latrodectus tredecimguttatus PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 59/188 (31.38%), Postives = 93/188 (49.47%), Query Frame = 3
Query:   39 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELV--KVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILK 596
            H AA+ G L+++K L+E   E L    S   T L  AS  GH  VV++L+  G+ +      NG TA+  A    HL++V+ L +       R + +G T    AV   ++ + + L+  K + + IN  +   ++ALH+A     +Q++ KLL   G+D  + N   +TALD A     S I   LK
Sbjct: 1009 HQAARYGHLDIVKYLVEE--EFLSVDGSKTDTPLCYASENGHFTVVQYLVSNGAKVNHDC-GNGMTAIDKAITKNHLQVVQFLAANGVDF-RRKNSRGTTPFLTAVAENALHIAEYLIREKRQDININEQNVDKDTALHLAVYYKNLQMI-KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLK 1191          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: TRPA1_RAT (Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 3
Query:   21 NGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSN--GKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEI 581
            +G    H A +QG    +  L+      + +      + LH A+S G +   + LL+  S    +   +  G T LH AA+NGH ++V+ LL K  G +  +D  G TALH A  G   + +  ++       + +D +GN+ALH A R+G  + V  LL+ N     ++NK + + L  A      E+
Sbjct:  413 DGCTPLHYACRQGAPVSVNNLLR-FNVSVHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKK--GALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNA--DILLNKKQASFLHIALHNKRKEV 596          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: TRPA1_MOUSE (Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus GN=Trpa1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 3
Query:   21 NGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSN--GKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEI 581
            +G    H A +QG    +  L+      + +      + LH A+S G +   + LL+  S    +   +  G T LH AA+NGH ++V+ LL K  G +  +D  G TALH A  G   + +  ++       + +D +GN+ALH A R+G  + V  LL+ N     ++NK + + L  A      E+
Sbjct:  413 DGCTPLHYACRQGVPVSVNNLL-GFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKK--GALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNA--DILLNKKQASFLHIALHNKRKEV 596          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: CSKI2_XENLA (Caskin-2 OS=Xenopus laevis GN=caskin2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 65/202 (32.18%), Postives = 97/202 (48.02%), Query Frame = 3
Query:    9 IKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRN-------DKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEK--TGHSEIGV 587
            IK  NG    H AA QG  E +++L+ A   +           LH A+  GH EV + LL+  S    + +   KT L  A   G +++V+ LL+    + L         D    T LH+A K   +E++  L+K+  + IN V   G +ALH A   G+ ++V KLL  NGVD  + N   +TALD   +  T H+ I +
Sbjct:   77 IKDGNGMRPLHYAAWQGQPEPVRLLLRASASVNAA-SHDGQIPLHLAAQYGHYEVSETLLQHQSNPCHVNKGK-KTPLDLACEFGRVKVVQLLLNSHLCVSLLEGTSKDPTDPNFTTPLHLAAKNGHLEVIRLLLKLG-IEINKVTKMG-TALHEAALCGKTEVV-KLLIENGVDVNIRNTYNQTALDIVNQFTTTHASIDI 273          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: ANKR1_BOVIN (Ankyrin repeat domain-containing protein 1 OS=Bos taurus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  117 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALD 551
            D    TALH A  +GH+ +V+ L+E G+ +         TA+H A+R G L+++K LL+K   I  R DK   T LH+AV+    E  + L+  E   +N  D +G++ LH A R  R +++ +LL   G D  V N + +T +D
Sbjct:  150 DEYKRTALHRACLEGHLAIVEKLIEAGAQI-EFRDMLESTAIHWASRGGSLDVLKLLLNKGAKISAR-DKLLSTPLHVAVRTGHYECAEHLIACE-ADLNAKDREGDTPLHDAVRLNRYKMI-RLLITYGADLNVKNCAGKTPMD 290          
BLAST of CK934380 vs. ExPASy Swiss-Prot
Match: ASB2_BOVIN (Ankyrin repeat and SOCS box protein 2 OS=Bos taurus GN=ASB2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   18 RNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQIVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIK 629
            + G+   H AA  G L  LK L  A P ++        TAL+ A+ +GHV+ ++FLL+ G+    I+  + +T L+ A    ++E V+ L+  +     R + +G TALH +V    +E+++ LV      +   +A G + L +A + G+++ ++ L    G D         +AL  A K GH E+   L   G    K+ K
Sbjct:  134 KEGWLPLHEAAYYGQLNCLKALHRAYPAVIDQRTLQEETALYLATCRGHVDCLQFLLQAGAE-PDISNKSRETPLYKACERKNVEAVRILVQYKADTNHRCN-RGWTALHESVARNDLEVMEILVS-GGAKVEAKNAYGITPLFVAAQSGQLEALRFLAKY-GADINTQASDSASALYEACKNGHEEVVEFLLSQGADANKTNK 333          
The following BLAST results are available for this feature:
BLAST of CK934380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ANKR1_MOUSE2.191e-1234.48Ankyrin repeat domain-containing protein 1 OS=Mus ... [more]
MIB_DROME2.862e-1227.95E3 ubiquitin-protein ligase mind-bomb OS=Drosophil... [more]
INVS_CHICK2.862e-1229.41Inversin OS=Gallus gallus GN=INVS PE=2 SV=2[more]
ANS1A_MOUSE2.862e-1225.36Ankyrin repeat and SAM domain-containing protein 1... [more]
LATA_LATTR3.738e-1231.38Alpha-latrotoxin-Lt1a OS=Latrodectus tredecimgutta... [more]
TRPA1_RAT4.882e-1228.57Transient receptor potential cation channel subfam... [more]
TRPA1_MOUSE4.882e-1228.57Transient receptor potential cation channel subfam... [more]
CSKI2_XENLA4.882e-1232.18Caskin-2 OS=Xenopus laevis GN=caskin2 PE=2 SV=1[more]
ANKR1_BOVIN4.882e-1235.17Ankyrin repeat domain-containing protein 1 OS=Bos ... [more]
ASB2_BOVIN6.376e-1228.43Ankyrin repeat and SOCS box protein 2 OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_F12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934380 ID=CK934380; Name=CK934380; organism=Citrus sinensis; type=EST; length=871bp
GGGCTGGTATCAAAGCAAGAAATGGCTACGATGCATTCCACATTGCTGCT
AAGCAAGGATGCTTGGAGGTATTGAAGATCCTCATGGAGGCACTTCCTGA
ACTTTTGATGACTTTTGATTCCTCGAACACCACAGCATTACACACAGCTT
CCTCACAAGGCCATGTTGAAGTAGTGAAATTTCTCTTGGAGAAAGGTAGT
ACCCTAGCCACCATTGCTAGAAGCAATGGGAAAACGGCTTTGCATTCTGC
AGCTAGGAATGGACATCTGGAGATTGTGAAGGCCCTTTTGAGTAAAGAAC
CTGGCATTGTTTTGAGGAACGATAAGAAGGGTCAGACAGCTCTCCATATG
GCCGTTAAAGGACAGAGTATTGAACTTGTGGACGAGCTGGTAAAGGTTGA
GCCTGTTATAATCAACATGGTTGATGCCAAGGGAAACTCTGCATTGCATA
TAGCAACCCGTAAGGGCCGGGTTCAGATTGTTCAGAAGCTGCTGAATATC
AATGGAGTTGACAAAGCAGTCATCAACAAATCCAGAGAAACTGCTCTTGA
CACTGCTGAGAAAACTGGGCATTCTGAAATTGGAGTCATCTTAAAAGAGC
ATGGTGTCCCATGTGGCAAATCCATCAAGCCCCAAGCAAACTCAGCTCGA
GAACTAAAGCAGGCTGTTAGTGACATAAAGCATGAGGTTCATGACCAGCT
CGAGCACACACGTGAAACACGTAAACATGTGCATGGTATAGCTAAGAGGA
TCAACAAAATGCATACGGAAGGGCTTAACAANNNNNNCAACTCCACCACA
GTTGTAGCTGTCCTCATTGCCACCGTTGCCTTTGCTGCCATCTTCAGTGT
CCCAGGGCAATTTGCTGATAA
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