CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STAA2 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain JH1) GN=gcvH PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.099e-34 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 +V +LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STAA1 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gcvH PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.099e-34 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 +V +LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBHB (Glycine cleavage system H protein OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvH PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.271e-34 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ DSHEWV+ +G+ +ATIGI++HAQ+ LGDVV+V+LP+V V+ SF VESVKA SD+ SP++G+VVE+NEEL SP L+N PYE GWI+KV++ + EL L DA++Y EEE Sbjct: 3 KTLKFTDSHEWVRDNGDGTATIGISEHAQEMLGDVVFVDLPDVEDEVEAGESFSLVESVKAASDIYSPITGEVVEINEELEDSPELINEEPYEGGWIVKVKLSDPSELDDLKDAEEYLSSIEEE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STRM5 (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.271e-34 Identity = 71/129 (55.04%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S + DLK+ SHEW +V+GN T+GI+DHAQ LGD+VYVELPEVG T K + VESVKA SDV SPVSG +VEVN LS P +N Y DGW+ VE+ NA EL +L+D D Y + E+ED Sbjct: 2 SEIPGDLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGATAKANEQIAVVESVKAASDVYSPVSGTIVEVNSALSDKPETINEDAYGDGWMYVVELSNAEELNELLDPDAYAEALEDED 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBSL (Glycine cleavage system H protein OS=Vibrio splendidus (strain LGP32) GN=gcvH PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.211e-33 Identity = 67/122 (54.92%), Postives = 92/122 (75.41%), Query Frame = 3 Query: 132 LKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 LK+ADSHEWVK +G+ + TIGI++HAQ+ LGDVV+V+LP+ ++ SF VESVKA SD+ +P+SG++VE+NEEL SP L+N PYE GWI+KV+M +A EL L DA++Y EE+ Sbjct: 5 LKFADSHEWVKDNGDGTVTIGISEHAQELLGDVVFVDLPDTEDEIEAGESFSLVESVKAASDIYAPISGEIVEINEELEDSPELINEEPYEGGWIVKVKMSDASELNNLKDAEEYLSSVEED 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STAAW (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MW2) GN=gcvH PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.211e-33 Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 +V +LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +++ L+ A++Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STAAS (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MSSA476) GN=gcvH PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.211e-33 Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 +V +LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +++ L+ A++Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_MARMS (Glycine cleavage system H protein OS=Marinomonas sp. (strain MWYL1) GN=gcvH PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.211e-33 Identity = 68/122 (55.74%), Postives = 93/122 (76.23%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYT 476 S++ ++LKYADSHEWV +G+ + T+GITDHAQD LGDVVYVELPEVG V F VESVKA SD+ +PV+G+V+EVN+ L+ +P L+N +P+E WI K+++ NA +L KL+DA Y+ Sbjct: 2 STIPENLKYADSHEWVLDNGDGTVTVGITDHAQDLLGDVVYVELPEVGTEVTATEQFSLVESVKAASDIYAPVNGEVIEVNDALNDAPELINEAPFEGAWIAKIKLSNAADLDKLLDAAGYS 123
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVY (Glycine cleavage system H protein OS=Vibrio vulnificus (strain YJ016) GN=gcvH PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.581e-33 Identity = 68/124 (54.84%), Postives = 93/124 (75.00%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ ++ SF VESVKA SD+ +PV+G+VVEVNEELS SP L+N PYE GWI+KV++ + EL L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIEED 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVU (Glycine cleavage system H protein OS=Vibrio vulnificus GN=gcvH PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.581e-33 Identity = 68/124 (54.84%), Postives = 93/124 (75.00%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ ++ SF VESVKA SD+ +PV+G+VVEVNEELS SP L+N PYE GWI+KV++ + EL L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIEED 126 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |