CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_CELJU (Glycine cleavage system H protein OS=Cellvibrio japonicus (strain Ueda107) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.009e-33 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S + K+LKY SHEW +V+ + + TIGITDHAQD LGDVVYVE PEVG V G VESVKA SD+ S VSGKVV VNE L +P VNSSPY++GW +V+ D+ EL + + AD+Y + E E+ Sbjct: 2 SDIRKELKYLSSHEWARVEEDGTVTIGITDHAQDALGDVVYVETPEVGSRVSLGEEAGVVESVKAASDIYSLVSGKVVAVNELLQDAPETVNSSPYDEGWFFRVQPDDVSELDEALSADEYRELLESEE 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_THEMA (Glycine cleavage system H protein OS=Thermotoga maritima GN=gcvH PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.848e-33 Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 123 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 +K KY +HEWV ++ AT+GIT+HAQ+ LGDVVYV+LPEVG VK+ ++ESVKA +DV +P+SGK+VEVNE+L + P L+N P +GW+ K+E+ + GEL+ L+D Y +FC +E Sbjct: 1 MKMKKYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE 124
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_AERHH (Glycine cleavage system H protein OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.848e-33 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S + +LKYA SHEW++V+ N A +GIT+HAQ+ LGD+V+V+LPEVG V ESVKA SD+ SPVSG+++ VNEEL SP LVNS PY GW+ ++++D+AGEL L+DA+ Y +EE Sbjct: 2 SHIPSELKYATSHEWIRVEANGEAVVGITEHAQELLGDMVFVDLPEVGKQVGAGDDCAVAESVKAASDIYSPVSGEILAVNEELEGSPELVNSDPYGAGWLFRIKLDDAGELANLLDAEGYQNVVDEE 129
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCM (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY+ GWI+KV+M + ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCH (Glycine cleavage system H protein OS=Vibrio cholerae GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY+ GWI+KV+M + ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBC3 (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY+ GWI+KV+M + ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_LISMO (Glycine cleavage system H protein OS=Listeria monocytogenes GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S+ KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV + S G++ESVK SD +PV+GKVV VNE L P L+NS+PY+ GWI+K+E ++K L+ +D Y K Sbjct: 2 SLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_LISMH (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S+ KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV + S G++ESVK SD +PV+GKVV VNE L P L+NS+PY+ GWI+K+E ++K L+ +D Y K Sbjct: 2 SLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_BACP2 (Glycine cleavage system H protein OS=Bacillus pumilus (strain SAFR-032) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32 Identity = 65/126 (51.59%), Postives = 88/126 (69.84%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S KDL+Y++ HEWVKV+G IGIT AQ LGD+V+VELPEVG + D FG+VESVK S++ +P++G +VEVN+EL SP VN SPYE W+I VE + E++ LM A+QY + +E+ Sbjct: 2 STPKDLRYSEEHEWVKVEGEKVRIGITHFAQSELGDIVFVELPEVGDKITADEPFGSVESVKTVSELYAPINGTIVEVNDELDDSPEFVNDSPYEKAWMIVVEPADTSEIENLMTAEQYEEMTKED 127
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_LISMF (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S+ KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV + S G++ESVK SD +PV+GKVV VNE L P L+NS+PY+ GWI+K+E ++K L+ +D Y K Sbjct: 2 SLPKDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELPEVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |