CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_LISMC (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S+ KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV + S G++ESVK SD +PV+GKVV VNE L P L+NS+PY+ GWI+K+E ++K L+ +D Y K Sbjct: 2 SLPKDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELPEVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_GEOSW (Glycine cleavage system H protein OS=Geobacillus sp. (strain WCH70) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 K+L+Y++ HEWV+V+G+ IGITD AQ LGD+V+VELPEVG + + FG+VESVK S++ +P+SGKVVEVNEEL+ +P VN SPYE W+I VE + E+ L+ A+QY + +E Sbjct: 5 KELRYSEEHEWVRVEGDKVRIGITDFAQSELGDIVFVELPEVGAEITANEPFGSVESVKTVSELYAPISGKVVEVNEELNDNPEYVNESPYEKAWMIVVEPYDMSEIDNLLTAEQYEEMVKE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ANASK (Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain K) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 +DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+ SFG VES KA S++ +P+SGKV+EVN+ LS +P +N PYE+GW+I +E + +L+ LMDA Y F EE++ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQE 128
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ANAD2 (Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 +DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+ SFG VES KA S++ +P+SGKV+EVN+ LS +P +N PYE+GW+I +E + +L+ LMDA Y F EE++ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQE 128
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_BACA2 (Glycine cleavage system H protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.982e-32 Identity = 65/126 (51.59%), Postives = 88/126 (69.84%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S KD++Y+ HEWVKV+ A IGIT AQ LGD+V+VELPEVG +K D FG+VESVK S++ +P++G V EVNE+L SP VN SPYE W+I VE +A E++ LM ++QY + +E+ Sbjct: 2 STPKDMRYSKEHEWVKVEDGKARIGITHFAQAELGDIVFVELPEVGAEIKADEPFGSVESVKTVSELYAPINGTVTEVNEDLDDSPEFVNESPYEKAWMIVVEPADAEEIENLMTSEQYDEMTQED 127
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_STRMK (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S + DLK+ SHEW +V+GN T+GI+DHAQ LGD+VYVELPEVG K VESVKA SDV SP+SGKVVEVN LS P +N Y +GW+ VE+ NA E+ +L+D D Y + E +D Sbjct: 2 SEIPGDLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGADAKAGEQIAVVESVKAASDVYSPISGKVVEVNSALSDKPETINEDAYGEGWMFVVELTNAEEVNELLDPDAYAEALENDD 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_SCHPO (Putative glycine cleavage system H protein, mitochondrial OS=Schizosaccharomyces pombe GN=SPBP19A11.01 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 138 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 + HEWVKVDG+ T+GIT +A + LG+VV+VELPE TV GAVESVK+ SDV SPVSG V +NE L SP V+SSP E+GWI K+++ + ELK L++ + Y +FC+EED+ H Sbjct: 47 FTKEHEWVKVDGDVGTVGITSYAANALGEVVFVELPEPETTVSVGDGIGAVESVKSASDVYSPVSGTVTSINESLGDSPDKVSSSPEEEGWICKIKLSSPDELKSLLNDESYAQFCKEEDASH 169
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_PSEA6 (Glycine cleavage system H protein OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 64/128 (50.00%), Postives = 92/128 (71.88%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S++ DL+YA +HEWV+ +G+ T+GI++HAQ+ LGD+V+VELP+VG TV ESVKA SDV +P+ G++V VNE+L SP LVNS PY DGW+ +++ D+A E++ L+DA+ Y EEE Sbjct: 2 SNIPSDLRYATTHEWVRPEGDGTFTVGISEHAQELLGDMVFVELPDVGATVSAGDDIAVAESVKAASDVYAPIGGEIVGVNEDLEDSPELVNSDPYGDGWLFRIKADDADEVEGLLDAEGYENSIEEE 129
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_MARAV (Glycine cleavage system H protein OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 65/129 (50.39%), Postives = 91/129 (70.54%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S + DLKY ++H+WV+VD + +AT+GITD AQ+ LGDVVY+ +PE+G TV G ESVK+ SDV SPV+G+V+E+NE+L P +VN PY DGW+ KV++ + GEL+ LMDA Y + E+ Sbjct: 2 SEIPSDLKYIETHQWVRVDADGTATVGITDFAQEQLGDVVYIGVPEMGATVNGGEEAGVAESVKSASDVFSPVTGEVIEINEKLEDEPEIVNEDPYGDGWMFKVKLADEGELEGLMDAAAYAEHVAAEE 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ANOFW (Glycine cleavage system H protein OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 62/126 (49.21%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S+ K+L+Y+ HEWV+V+GN+ IGITD AQ LGD+V+VELPEVG + + FG+VESVK S++ +P+SGKVV VNEEL+ +P VN SPY+ W+I +E + E+ L+ A+QY + ++ Sbjct: 2 SIPKELRYSQEHEWVRVEGNTVRIGITDFAQSELGDIVFVELPEVGAQLTANEPFGSVESVKTVSELYAPISGKVVAVNEELNDNPEYVNESPYDKAWMIVIEPSDLSEVDNLLTAEQYEQMINQD 127 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |