CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_YERE8 (Glycine cleavage system H protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32 Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 S+V DLKYA SHEWV+ DG+ ++GIT+HAQ+ LGD+V+V+LPEVG V + ESVKA SD+ +P+SG+++ VN EL SSP LVNS+PY DGW+ ++ + EL L+DA+ Y EE Sbjct: 2 SNVPADLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAVAESVKAASDIYAPISGEIIAVNAELESSPELVNSAPYTDGWLFSIKASDESELDSLLDAEAYLATIEE 128
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_SACD2 (Glycine cleavage system H protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32 Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S + +LKY +SHEW +V+ + + TIGITDHAQ+ LGDVV+VE+PEVG V G VESVKA SD+ SPVSG+V+ VNE L +P VNSSPY+DGW KV+ D+ EL+K + + Y E +D Sbjct: 2 SELRSELKYLESHEWARVEEDGTVTIGITDHAQEALGDVVFVEVPEVGSQVSIGEEAGVVESVKAASDIYSPVSGEVIAVNEALEDAPETVNSSPYDDGWFFKVKPDDLDELEKALSMEDYKAAIESDD 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_METI4 (Glycine cleavage system H protein OS=Methylacidiphilum infernorum (isolate V4) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.677e-32 Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 ++ D Y D+HEWV V G+ AT+GIT+HAQ L D+VY+ELP+VG Q A G VESVKA SD+ +PVSG+++ VN +L P+L+NS+PY +GWI K++M N EL L DA+ Y + ++++ Sbjct: 2 NIPSDRLYTDTHEWVNVSGDVATVGITEHAQRELSDIVYIELPKVGERFNQKAVVGVVESVKAASDLYAPVSGEILAVNTQLVEQPSLINSNPYGEGWIFKMKMTNPDELSSLKDAEAYQELLQDKE 128
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_HALOH (Glycine cleavage system H protein OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.677e-32 Identity = 61/125 (48.80%), Postives = 89/125 (71.20%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 +V ++L Y +HEW+KVDG++A +G+TD+AQ LGD+V+VELPEV Q F +ESVKA SDV PV G+V+E NEEL +P LVN PY GW++K+++ + EL+ LM +++Y ++ EE Sbjct: 2 NVPENLMYTKNHEWIKVDGDTALVGVTDYAQKELGDIVFVELPEVSDEFAQSEGFAVLESVKAVSDVYLPVGGEVLEANEELLENPELVNQEPYASGWLVKIKLADKKELEDLMSSEEYARYLEE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_CHRVO (Glycine cleavage system H protein OS=Chromobacterium violaceum GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.677e-32 Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S++ +LKY DSHEW++++ + S T+GIT HAQ+ LGD+V+VELP+VG ++ +D G VESVKA SDV P++G+V+ VNEEL P L NS PY DGW K++ NA +L LMDA Y K Sbjct: 2 SNIPAELKYVDSHEWLRLEADGSVTVGITAHAQELLGDIVFVELPKVGASLAKDEQAGVVESVKAASDVYCPIAGEVLAVNEELEGEPELANSDPYGDGWFFKIKPANAADLNGLMDAAAYAK 124
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ALTMD (Glycine cleavage system H protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.677e-32 Identity = 66/128 (51.56%), Postives = 92/128 (71.88%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S++ DL+YA +HEWV+ +G+ T+GI++HAQ LGD+V+VELP+VG V ESVKA SDV +P+SG+VVEVNE+L SP LVNS PY DGW+ K++ D+A E++ L+DA+ Y +EE Sbjct: 2 SNIPTDLRYAATHEWVRPEGDGVFTVGISEHAQGLLGDMVFVELPDVGDAVSTGDDICVAESVKAASDVYAPISGEVVEVNEDLEDSPELVNSDPYGDGWLFKIKADDAAEVEGLLDAEGYENSIDEE 129
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_OCEIH (Glycine cleavage system H protein OS=Oceanobacillus iheyensis GN=gcvH PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.133e-31 Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 S+ +DL Y+ HEWVK + IGITD AQD LGD+V+VELPE+G +K D FG+VESVK S++ +PVSGKVVE+N++L SP VN SPYE W+I +E + EL++L+ A+ Y F ++ Sbjct: 2 SLPQDLLYSKEHEWVKQEDGKLRIGITDFAQDELGDIVFVELPEIGEELKVDDPFGSVESVKTVSELYAPVSGKVVEINDDLEDSPEYVNESPYEKAWMIVIEPSDEKELEELLSAENYEAFIQD 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_VIBF1 (Glycine cleavage system H protein OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.933e-31 Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 KDLK+ SHEWV+ +G+ + T+GI+DHAQ LGDVV+V+LPEV V F VESVKA SD+ SPV+G +VE+NEEL SP LVN PYE GWI ++++ ++ EL+ L+ +D Y + +EE Sbjct: 3 KDLKFTTSHEWVRDNGDGTVTVGISDHAQGLLGDVVFVDLPEVDDEVTTGEGFSLVESVKAASDIYSPVTGVIVEINEELEDSPELVNEEPYESGWIARIKLSDSSELESLIPSDTYLESLDEE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ALKOO (Glycine cleavage system H protein OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.933e-31 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 3 Query: 123 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 + L Y+ HEWVKV+GN A IGITD AQ LG++V+VELPEV + Q +F VESVKA SD SPVSGKV+EVNEEL +P L+N + + WIIKVE+ N EL+ L+ +Y +FCE+E Sbjct: 4 VAGLLYSKDHEWVKVEGNEAYIGITDFAQHALGEIVFVELPEVDDEIAQGDAFSVVESVKAASDAYSPVSGKVLEVNEELDGAPELLNEDAFAN-WIIKVELTNPSELEGLLSDKEYAEFCEKE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_SALAR (Glycine cleavage system H protein OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S+V +LKY+ HEW++ + + T+GIT+HAQ+ LGD+V+V+LPEVG TV ESVKA SD+ +PVSG++V VN+ LS SP LVNS PY DGWI K++ N EL+ L+DA Y E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYADGWIFKIKASNESELESLLDATAYEALLEDE 129 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |