CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_RUBXD (Glycine cleavage system H protein OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 63/128 (49.22%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 + + +DL Y +HEW +++G++AT+GITDHAQ+ LGDVV+VELPEVG +V+ FG +ESVKA SD+ SPVSG+V EVN L SP VN PY +GW+++V + E L+ ++Y + EEE+ Sbjct: 2 AEIPQDLVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTIESVKAVSDLYSPVSGEVTEVNTSLEESPEKVNEDPYGEGWLLRVRL---SEEPDLLSPEEYARRLEEEE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_PARL1 (Glycine cleavage system H protein OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 64/122 (52.46%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 123 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 488 + D+++ D HEWV+VDG+ ATIGITD+AQ+ LGDVV+VELPEVG + VESVKA S+V SPVSG+V++VN ++ +PA VN + DGW IK+ + + EL KLMD Y++F E Sbjct: 1 MSDIRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAASEVYSPVSGEVIDVNSDIEKTPAGVNENAMGDGWFIKLRLADPSELDKLMDEAAYSEFVE 122
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_DROME (Glycine cleavage system H protein, mitochondrial OS=Drosophila melanogaster GN=ppl PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKV-DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 482 S + K+ +Y + HEWV+V G++A +GI+ +AQ+ LGDVV+ +LPE G +KQD GA+ESVKA S+V SPVSGKV+E N E+ +PALVNSS YE GW+ KV++ N EL+ LM DQY F Sbjct: 35 SLLAKERRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVKAASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAF 158
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ALISL (Glycine cleavage system H protein OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 64/124 (51.61%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 126 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 KDLK+ SHEWV+ +G+ + T+GI++HAQ LGDVV+V+LP+V V +F VESVKA SD+ +P+SG +VE+NEEL SP LVN PYE GWI ++++ + G+L+ L+ DQY + EEE Sbjct: 3 KDLKFTASHEWVRENGDGTVTVGISNHAQGLLGDVVFVDLPDVDDEVTAGENFSLVESVKAASDIYAPISGVIVEINEELEDSPELVNEEPYEGGWIARIKLSDDGDLENLIPGDQYLESIEEE 126
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_LISW6 (Glycine cleavage system H protein OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 3 Query: 117 SVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTK 479 S+ KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV + S G++ESVK SD +PV+GKVV VNE L P L+NS+PY+ GWI+K+ ++ L+ +D Y K Sbjct: 2 SLPKDLLYTEEHEWVKADDGSYIIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLTEVEEADVTALLSSDDYEK 122
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_KLEP3 (Glycine cleavage system H protein OS=Klebsiella pneumoniae (strain 342) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 63/128 (49.22%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S+V +LKY+ HEW++ + + T+GIT+HAQ+ LGD+V+V+LPEVG TV+ A ESVKA SD+ +P+SG++V VNEEL+ SP LVNS PY DGWI K++ + ++ L+DA Y E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYSDGWIFKIKASDEAQVAALLDATAYEALLEDE 129
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ERWCT (Glycine cleavage system H protein OS=Erwinia carotovora subsp. atroseptica GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 63/129 (48.84%), Postives = 94/129 (72.87%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEED 497 S+V +LKYA SHEWV +G+ ++GIT+HAQ+ LGD+V+++LPEVG V ESVKA SD+ +P+SG+VVEVNE+L +SP LVNS+PY DGW+ ++++ + +L +L+DA+ Y EE++ Sbjct: 2 SNVPTELKYATSHEWVLHEGDGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEVVEVNEDLENSPELVNSAPYTDGWLFRIKISDESDLDELLDAEGYQASLEEDE 130
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_CYTH3 (Glycine cleavage system H protein OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 129 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYT 476 +LKY+ HEWV+V+G +A +GITD AQ LGD+VY+++ VG T+ ++A FG +E+VK SD+ PVSG+V+E N EL S+P LVNS PY GWI+KV + NA +L L+DA YT Sbjct: 6 ELKYSKDHEWVRVEGQTAYVGITDFAQKELGDIVYLDVTSVGQTIDKEAIFGTIEAVKTVSDLFMPVSGEVLEFNAELESAPELVNSDPYGKGWIVKVTLANASDLDALLDAAAYT 121
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_YERPY (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.625e-31 Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 S+V +LKYA SHEWV+ DG+ ++GIT+HAQ+ LGD+V+V+LPEVG V + ESVKA SD+ +P+SG++V VN EL +SP LVNS+PY DGW+ ++ + EL L+DAD Y EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_YERPS (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis GN=gcvH PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.625e-31 Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 114 SSVIKDLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 491 S+V +LKYA SHEWV+ DG+ ++GIT+HAQ+ LGD+V+V+LPEVG V + ESVKA SD+ +P+SG++V VN EL +SP LVNS+PY DGW+ ++ + EL L+DAD Y EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |