CK934387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59 Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 705 D Q++LAA HLG +N E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+ S+R +GQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W VM DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVMPDLYFYR 205
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59 Identity = 109/208 (52.40%), Postives = 146/208 (70.19%), Query Frame = 1 Query: 85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II+L WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+ Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRD 209
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59 Identity = 110/194 (56.70%), Postives = 144/194 (74.23%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYRE 708 D Q++LAA VHLG+KN E Y++K R DG+ II++GKTWEK+ +AAR+I AI N D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D +SP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR+ Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_CAEBR (40S ribosomal protein SA OS=Caenorhabditis briggsae GN=rps-0 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58 Identity = 108/200 (54.00%), Postives = 149/200 (74.50%), Query Frame = 1 Query: 124 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI--RPGHKWD---VMVDLFFYRE 708 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + G D +M DL+FYR+ Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGKEIMPDLYFYRD 211
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_CAEEL (40S ribosomal protein SA OS=Caenorhabditis elegans GN=rps-0 PE=1 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58 Identity = 106/200 (53.00%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 124 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKW-----DVMVDLFFYRE 708 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + ++M DL+FYR+ Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRD 211
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.484e-58 Identity = 110/193 (56.99%), Postives = 139/193 (72.02%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 705 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYR 205
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.484e-58 Identity = 110/193 (56.99%), Postives = 139/193 (72.02%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 705 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYR 205
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58 Identity = 107/199 (53.77%), Postives = 143/199 (71.86%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+ Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRD 209
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58 Identity = 107/208 (51.44%), Postives = 146/208 (70.19%), Query Frame = 1 Query: 85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ +VDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+ Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRD 209
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_ECHGR (40S ribosomal protein SA OS=Echinococcus granulosus PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56 Identity = 104/199 (52.26%), Postives = 142/199 (71.36%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE DI++M+AA+VHLG+ N ++QM++YV+ R ++G +II+L KTWEKL +AAR I AIENP D+++ +P QR LKF YT ++ GR TPG FTNQ+Q+ F EPRLLI+ DP+ DHQP++E + NIP I FC+TDSP++ VDIGIP NN K+SI + W+LAR V ++ G DV++DLF RE Sbjct: 8 LELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLFLMRE 205 The following BLAST results are available for this feature:
BLAST of CK934387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934387 ID=CK934387; Name=CK934387; organism=Citrus sinensis; type=EST; length=710bpback to top |