CK934387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METS5 (30S ribosomal protein S2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps2p PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 83/202 (41.09%), Postives = 125/202 (61.88%), Query Frame = 1 Query: 109 QLSQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 696 Q +K A I+++ L+A VH+GT C MER++++ R +G+Y++++ K E+L++AA+ + + P I+ ++RPY V KFA+ A A+ GR PG TN F EP +L+++DPRTD Q IKEAA IP +AF DTD+ + YVD+ IP+NNKG+ S+ L+W LAR +L+ R I P V V+ F Sbjct: 19 QRGEKGAIIELLVPLENYLSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFLSRFQ-PQSILAVASRPYAFTPVQKFAEVVGARAVVGRMVPGMLTNPYLEDFIEPEVLLVSDPRTDTQAIKEAADMGIPVVAFSDTDAKVDYVDLVIPSNNKGRKSLALLYWALARQILRERKEIAPDADIPVKVEEF 219
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_THEPD (30S ribosomal protein S2P OS=Thermofilum pendens (strain Hrk 5) GN=rps2p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.033e-37 Identity = 83/209 (39.71%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 70 EIKMATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 696 E+K+ G P ++M LAA + +GTK ME +++ R DG+Y++++ KT E++++AA++I + P +V S R YG R V KF + GR PGTFTN + F E L+++TDPR D Q + EA IP IA CDTDSP+ VD+ IP NN+G+ ++ +FWLLAR VL++RG I P + V + F Sbjct: 5 ELKLLEGQLLIP---------LEMYLAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARYD-PSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLRIRGDIPPNGELPVPLSDF 203
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METST (30S ribosomal protein S2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.567e-36 Identity = 74/190 (38.95%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 +S+ + LAA +H+GT+ ME+Y+++ R DG++++++ + +K+ +AA+++ E P DI+V S R YGQ V KF + T I GR PGT TN F EP++L++TDPR+D Q + EA IP +A CDT++ + VD+ IP NNKG+ +I ++WLLAR +L+ RG + ++D+ Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTKDMEKYIYRVRADGLHVLDVKSSNDKIIVAAKLLSKYE-PDDILVVSTRQYGQSPVKKFGEVTGTKTIPGRFIPGTLTNPQYAKFIEPKILVVTDPRSDSQAVIEAKQNGIPVVALCDTENLLCNVDVVIPVNNKGRKAIALVYWLLARQILRERGILSSDEEFDL 189
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_SULTO (30S ribosomal protein S2P OS=Sulfolobus tokodaii GN=rps2p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.046e-36 Identity = 81/194 (41.75%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 100 APRQLSQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 A Q S+K A I+++ L+A VH+GT C ME++V++ R +G+Y++++ K E+L++AAR + P +I+ ++RPY V KFA+ AI GR PG TN + EP +++ TDPRTD Q IKEA+ IP +AF DTD+ + +VD IPANNKG+ S+ L+W+LAR +L+ R I P Sbjct: 16 AELQKSEKGAVIELLVPLDTYLSAGVHIGTHTCTKYMEKFVYRVRPEGLYVLDVRKIDERLRIAARFLSRF-TPENILAVTSRPYAFTPVTKFAEVIRGRAIVGRFPPGILTNPQLPNHIEPEVIVATDPRTDLQAIKEASKVGIPVVAFADTDAKVDFVDFIIPANNKGRKSLALLYWVLARQILRERREIPP 208
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METTH (30S ribosomal protein S2P OS=Methanobacterium thermoautotrophicum GN=rps2p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.673e-36 Identity = 76/190 (40.00%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 +S+ + LAA +H+GT+ ME+Y+++ R+DG+Y++++ KT +++ A++ + E P DI+ S R YGQ V KF + T A I GR PGT TN F EP +L+ TDPR+D Q I EA IP +A CDT++ + VDI IP NNKG+ +I ++WLLAR L+ +G ++ D+ Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTADMEKYIYRVRSDGLYVLDIRKTNDRVIAASKFLSKYE-PDDILAVSTRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNPNYAKFIEPEVLVATDPRSDSQAIIEAKQIGIPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLLARQFLREKGILKEDEDLDI 189
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_ENTBH (40S ribosomal protein S0 OS=Enterocytozoon bieneusi (strain H348) GN=RPS0 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.491e-36 Identity = 79/192 (41.15%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 136 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR-GTIRPGHKWDVMVDLFFYRE 708 +++LA + HLG M++Y++ R D + + +L KTW+K +AAR + D+ V S + +G++ VLKFA+ T A + GR PG+FTN + EPRL+I++DP D Q I+EAA N PTIAFC+TD ++YVDI IP NN+ +IG F++L+R++ ++ GT P + V+LFFYR+ Sbjct: 14 KLLLATQAHLGGVKVTKPMKKYIYGERQDKVSVFDLKKTWDKFILAARAFCGLNYGDDVTVISCKTFGKKPVLKFAETTGAKSYTGRFIPGSFTNTTIRNSCEPRLIIVSDPIVDKQAIEEAAKVNCPTIAFCNTDCDLKYVDIAIPLNNRSPKAIGASFFILSRIIRYIKFGT--PMDQDIKEVELFFYRD 203
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_HYPBU (30S ribosomal protein S2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps2p PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.559e-36 Identity = 74/175 (42.29%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 ++ L+A VH+GT C M ++V++ R DG+YI+++ KT E+L++AA+ + E P I+ S R YGQR V KF Y AI GR PGTFTN + EP ++++TDPR D Q + EAA IP +A DTD+ + +D+ IP NNKG+ S+ ++W+L R +L+ +G I Sbjct: 23 LERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLARFE-PSKIVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSLEWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRVENIDLVIPVNNKGRKSLALVYWILTREILREQGKI 196
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_THEAC (30S ribosomal protein S2P OS=Thermoplasma acidophilum GN=rps2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.016e-35 Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 1 Query: 157 VHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 696 VH+GT+ M+ Y+FK RNDG+YI+++ KT KL +A +++ E P DI+V + R Y R V KFA+ T A AI GR PGT TN + E +++I+TDP D Q +KEA IP IA CD ++ +VD+ IP NNKG+ S+ ++WLLAR +L+ RGTI ++ +D F Sbjct: 17 VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_SULAC (30S ribosomal protein S2P OS=Sulfolobus acidocaldarius GN=rps2p PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.955e-35 Identity = 73/171 (42.69%), Postives = 113/171 (66.08%), Query Frame = 1 Query: 145 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 L+A VH+GT C MER++++ R +G+Y++++ K E+L++AA+ I P ++ ++RPY V KF++ I+GR PGT TN ++ EP +LI+TDPRTD Q IKEA+ IP +AF DTD+ + ++D+ IPANNKG+ S+ L+W+LAR +L+ R I Sbjct: 37 LSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRFR-PEAVLTVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNPYLDNYIEPEVLIVTDPRTDLQAIKEASKVGIPIVAFTDTDARVDFIDVIIPANNKGRKSLALLYWVLARQILRERKEI 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_THEVO (30S ribosomal protein S2P OS=Thermoplasma volcanium GN=rps2p PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.467e-34 Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 1 Query: 157 VHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 696 VH+GT+ M+ Y+FK RNDG+YI+++ KT KL A +++ + P DI+V + R Y R V KFA+ T A +I GR PGT TN + E +++++TDP D Q +KEA IP IA CD ++ +VD+ IP NNKG+ S+ ++WLLAR +L+ RGTI ++ +D F Sbjct: 17 VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIAAGKMLARFD-PQDILVVAQRQYAFRPVAKFAEVTGAVSITGRFNPGTLTNPSLKFYKEVKVIVVTDPLADVQAMKEAIKIGIPIIALCDANNKTDFVDLVIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195 The following BLAST results are available for this feature:
BLAST of CK934387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934387 ID=CK934387; Name=CK934387; organism=Citrus sinensis; type=EST; length=710bpback to top |