CK934387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METKA (30S ribosomal protein S2P OS=Methanopyrus kandleri GN=rps2p PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 73/178 (41.01%), Postives = 114/178 (64.04%), Query Frame = 1 Query: 145 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWD 678 LAA VH+GT+ ME ++++ R DG+++I++ KT E++++AA + ++ N +I+V S R YGQ+ V KFA+ T AI GR PGT TN + EP +++LTDPR D Q + EA IP +A CDTD+ VD+ IP NNKG+ ++ ++WLLAR +L+ G + +++ Sbjct: 15 LAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFL-SMYNTDEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLTDPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKKLGRLEEDEEFE 191
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_IGNH4 (30S ribosomal protein S2P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps2p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34 Identity = 77/178 (43.26%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRN-DGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++M L VH+GTK M+R+V+KRRN DG+ I+++ K +++++AA+ + E P I+V S R YG + V FA++T A + GR PGT TN + EP ++++TD R D Q I EAA IP +A CDTD+ VD+ IP NNKG+ S+ L+WLL R VL RG + P Sbjct: 16 LEMYLQHGVHIGTKMVTNYMKRFVYKRRNIDGLAILDVRKIDQRIRVAAKFLSRFE-PEKIMVVSVRQYGHKPVTMFAQFTGAKPVIGRFVPGTLTNPALEVYYEPDVILVTDTRMDQQAIVEAAEIGIPVVAICDTDNKTENVDLIIPGNNKGRKSLALLYWLLTRQVLVERGQLSP 192
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METJA (30S ribosomal protein S2P OS=Methanocaldococcus jannaschii GN=rps2p PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33 Identity = 69/184 (37.50%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 112 LSQKE--ADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 +S+KE + LA+ +H+GT+ ME+++++ R+DG+Y++++ KT E+L++AA+ + E P DI+ S R Y + +F KYT +AGR PGT TN F EP ++ ++DPR D Q +KEA +P + CDT+ ++D+ IP NNKGK ++ +++LL R L+ RG I Sbjct: 1 MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVI 183
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_METTP (30S ribosomal protein S2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps2p PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32 Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 I LAA VH+GT+ M +Y+++ R DG+Y++++ T +++++A + + E P I+V SAR YGQR FAK A A GR P T TN + EP +L++TDP D Q +KEA IP +A CDT++ VD+ IP NNKG+ ++ ++WLLAR VL+ RG Sbjct: 19 IDEYLAAGVHIGTQQKTSDMMKYIYRVRTDGLYVLDVQATDKRIRLAGKFLANYE-PSKILVVSARQYGQRPATMFAKAVGARANVGRFIPNTLTNPHFAGYIEPDVLLVTDPAGDGQAVKEAVDIGIPVVALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLLARQVLRERG 190
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_PYRAR (30S ribosomal protein S2P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps2p PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 73/179 (40.78%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AAR I P ++V + RPYG + V F KY A+ GR PGT TN + E LL + DP+ D Q + EAA +P IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAARFIARYP-PDRVLVHTTRPYGFKPVQMFCKYVGCKALTGRFIPGTLTNPNLPHYQEADLLFVVDPKLDAQAVAEAAKMGVPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILARQVLRERGELKP 190
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_NOSCE (40S ribosomal protein S0 OS=Nosema ceranae (strain BRL01) GN=RPS0 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32 Identity = 76/193 (39.38%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVF-KRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 ++++L ++ HLG MERYVF R+ + I +I++ KTWEK +AAR+ ++++P D +V S + +G++ VLKF + T A + GR PGTF N EPR+LI++DP D Q + E + N+ TIAFC+TD+ + +VDI IP NN+ SI ++L+R++ M+ T P + V+LF YR+ Sbjct: 13 VKLILISQGHLGGIKTSKLMERYVFGTRKLENIKVIDIEKTWEKFILAARMFCSLKHPSDAVVVSTKTFGRKGVLKFCESTCATPVIGRFIPGTFCNNQVKRPLEPRVLIVSDPFADKQAVIEGSHVNLQTIAFCNTDNDVSFVDIVIPMNNRSPVSISAGLFILSRLIRFMK-TGEPLDENMKEVELFIYRD 204
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_PYRIL (30S ribosomal protein S2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps2p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.216e-32 Identity = 72/179 (40.22%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E +++ R DG+ I ++ K E+L++AA+ I + P I+V + RPYG + V F K+ A+ GR PGT TN ++ E LL + DP+ D Q + EAA IP IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEERGFIYAVRPDGLRIFDIKKIDERLRIAAKFISRYQ-PDRILVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPYLPNYTEIDLLFVVDPKLDAQAVAEAAKMGIPIIALVDTDTPHQYIDFMIPCNNKGRRSLALIFWILARQVLRERGELKP 190
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_CALMQ (30S ribosomal protein S2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps2p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32 Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTK--NCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 696 P Q + ++ +AA V LG + N Q ++F R DG+ I NL + E++++AAR+I P ++V S +PY + + F K+ + GR PGT TN T + LL++ DP+TD Q I EA+L IP IA DTDS ++D+ IP NNKG++S+ +FWLLAR VL+ RG ++P V + F Sbjct: 8 PEQGEEYLVPVERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELKPNEDLPVSWEEF 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_THENV (30S ribosomal protein S2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps2p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.897e-32 Identity = 69/179 (38.55%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AA+ I P ++V + RPYG + V F K+ A+ GR PGT TN + E LL + DP+ D Q + EAA IP +A DTD+P +Y+D+ +P NNKG+ S+ +FW+LAR +L+ RG ++P Sbjct: 12 LEKYLSAGVRLGTRLSNRYLEERGFIFAVRPDGLRIFDIKKIDERLKIAAKFIARYP-PDRVLVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPNLPHYQEVDLLFVVDPKLDAQAVTEAAKMGIPVVALVDTDTPHQYIDLMVPCNNKGRKSLALIFWILARQILRERGELKP 189
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RS2_PYRAE (30S ribosomal protein S2P OS=Pyrobaculum aerophilum GN=rps2p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.162e-31 Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AA+ I A P ++V + RPYG + V F K+ A+ GR PGT TN + E LL + DP+ D Q + EAA IP IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAAKFI-ARYRPERVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGTLTNPNLPHYQEVDLLFVVDPKLDAQAVAEAAKMGIPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILARQVLRERGELKP 190 The following BLAST results are available for this feature:
BLAST of CK934387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934387 ID=CK934387; Name=CK934387; organism=Citrus sinensis; type=EST; length=710bpback to top |