CK934387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_DROPS (40S ribosomal protein SA OS=Drosophila pseudoobscura pseudoobscura GN=sta PE=3 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 7.954e-73 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR+ Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_DROPE (40S ribosomal protein SA OS=Drosophila persimilis GN=sta PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 7.954e-73 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR+ Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_XENTR (40S ribosomal protein SA OS=Xenopus tropicalis GN=rpsa PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA + A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_SHEEP (40S ribosomal protein SA OS=Ovis aries GN=RPSA PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_RAT (40S ribosomal protein SA OS=Rattus norvegicus GN=Rpsa PE=1 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_PIG (40S ribosomal protein SA OS=Sus scrofa GN=RPSA PE=1 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_MOUSE (40S ribosomal protein SA OS=Mus musculus GN=Rpsa PE=1 SV=4) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_ICTPU (40S ribosomal protein SA OS=Ictalurus punctatus GN=rpsa PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 132/199 (66.33%), Postives = 155/199 (77.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+YV+KR++DGIYIINL KTWEKL +AAR IVAIENP D+ V S+R GQRA LKFA T A AGR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGIYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRACLKFASGTGATTFAGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_HUMAN (40S ribosomal protein SA OS=Homo sapiens GN=RPSA PE=1 SV=4) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206
BLAST of CK934387 vs. ExPASy Swiss-Prot
Match: RSSA_CERAE (40S ribosomal protein SA OS=Cercopithecus aethiops GN=RPSA PE=2 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72 Identity = 130/199 (65.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 708 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+ Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206 The following BLAST results are available for this feature:
BLAST of CK934387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934387 ID=CK934387; Name=CK934387; organism=Citrus sinensis; type=EST; length=710bpback to top |