CK934390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.192e-69 Identity = 126/161 (78.26%), Postives = 138/161 (85.71%), Query Frame = 1 Query: 115 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 165 HSP 2 Score: 144.821 bits (364), Expect = 4.733e-34 Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF Sbjct: 148 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 217
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.034e-69 Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR 177 HSP 2 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 160 LAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.656e-69 Identity = 126/165 (76.36%), Postives = 141/165 (85.45%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 139.428 bits (350), Expect = 1.988e-32 Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 160 LAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.469e-69 Identity = 130/161 (80.75%), Postives = 138/161 (85.71%), Query Frame = 1 Query: 115 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 GKAV L PS E+ GR+SMRKT +K VSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSI + L G ++G R Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYR 173 HSP 2 Score: 140.584 bits (353), Expect = 8.925e-33 Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF Sbjct: 156 LAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.729e-69 Identity = 127/165 (76.97%), Postives = 140/165 (84.85%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTA SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 144.05 bits (362), Expect = 8.073e-34 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 160 LAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.729e-69 Identity = 126/165 (76.36%), Postives = 139/165 (84.24%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR 177 HSP 2 Score: 136.732 bits (343), Expect = 1.289e-31 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQV+LMGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGF Sbjct: 160 LAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.249e-68 Identity = 127/163 (77.91%), Postives = 137/163 (84.05%), Query Frame = 1 Query: 115 GKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 GKAV L P+ +E+ GRI+MRKT K +V S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 177 HSP 2 Score: 144.05 bits (362), Expect = 8.073e-34 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 160 LAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.937e-68 Identity = 127/165 (76.97%), Postives = 141/165 (85.45%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176 HSP 2 Score: 143.665 bits (361), Expect = 1.054e-33 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 159 LAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 8.545e-68 Identity = 125/164 (76.22%), Postives = 139/164 (84.76%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAG SADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176 HSP 2 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGF Sbjct: 159 LAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGF 229
BLAST of CK934390 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.116e-67 Identity = 124/165 (75.15%), Postives = 138/165 (83.64%), Query Frame = 1 Query: 109 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGRSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIFG----HLGLPGGLDGSR 585 F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYG DRVKYLGPFSGE PSYLTGEFP DYGWDTAG SADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSI + L G ++G R Sbjct: 13 FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 142.124 bits (357), Expect = 3.068e-33 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 545 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 754 LAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF Sbjct: 160 LAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229 The following BLAST results are available for this feature:
BLAST of CK934390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934390 ID=CK934390; Name=CK934390; organism=Citrus sinensis; type=EST; length=755bpback to top |