CK934395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_LOLPR (DNA-directed RNA polymerase subunit beta OS=Lolium perenne GN=rpoB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+Q L EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQALAEELNKFPAIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_WHEAT (DNA-directed RNA polymerase subunit beta OS=Triticum aestivum GN=rpoB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+Q L EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQALAEELDKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_PELHO (DNA-directed RNA polymerase subunit beta OS=Pelargonium hortorum GN=rpoB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPK 707 MLGD N GM+TIP LNQIQFEGFCRF+DQGL EEL +FPK Sbjct: 1 MLGDRNEGMATIPALNQIQFEGFCRFLDQGLIEELSQFPK 40
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_CYCTA (DNA-directed RNA polymerase subunit beta OS=Cycas taitungensis GN=rpoB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML D N G STIP +IQFEGFCRFIDQGL EEL FPKIEDTD Sbjct: 1 MLLDENKGTSTIPEFGKIQFEGFCRFIDQGLIEELQNFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_AGRST (DNA-directed RNA polymerase subunit beta OS=Agrostis stolonifera GN=rpoB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+Q L EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQALAEELDKFPIIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_PINKO (DNA-directed RNA polymerase subunit beta OS=Pinus koraiensis GN=rpoB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 3 Query: 597 DGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 D N G TIP +IQFEGFCRFIDQGL EEL+ FPKIEDTD Sbjct: 4 DENEGAFTIPEFGKIQFEGFCRFIDQGLMEELHNFPKIEDTD 45 The following BLAST results are available for this feature:
BLAST of CK934395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934395 ID=CK934395; Name=CK934395; organism=Citrus sinensis; type=EST; length=724bpback to top |