CK934399

Overview
NameCK934399
Unique NameCK934399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE 306
            APE+++ + Y G +VD+WS GV+L+ L  G LPF+D ++  +++KI  G +  P++ +P +   +  +L  DP  R T+ +I    WFK+D  +  FP +
Sbjct:  187 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPED 286          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE 306
            APE+++ + Y G +VD+WS GV+L+ L  G LPF+D ++  +++KI  G +  P++ +P +   +  +L  DP  R T+ +I    WFK+D  +  FP +
Sbjct:  142 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPED 241          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE 306
            APE+++ + Y G +VD+WS GV+L+ L  G LPF+D ++  +++KI  G +  P++ +P +   +  +L  DP  R T+ +I    WFK+D  +  FP +
Sbjct:  192 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPED 291          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: TRIB2_PONAB (Tribbles homolog 2 OS=Pongo abelii GN=TRIB2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    4 VAPEILAKKG-YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLNDSVGCNVGSEKYLNAF 369
            V+PEIL   G Y G   D+WS GV+L+ +  G  PF+D    +++ KI +G++  P+  SP  K  I  +L  +P+ R+T  EIL  PWF  D+      +   +++D +  +V  E+ L+ F
Sbjct:  219 VSPEILNTSGSYSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQEILDHPWFSTDFSVSNSGYGAKEVSDQLVPDVNMEENLDPF 341          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: TRIB2_CANFA (Tribbles homolog 2 OS=Canis familiaris GN=TRIB2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    4 VAPEILAKKG-YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLNDSVGCNVGSEKYLNAF 369
            V+PEIL   G Y G   D+WS GV+L+ +  G  PF+D    +++ KI +G++  P+  SP  K  I  +L  +P+ R+T  EIL  PWF  D+      +   +++D +  +V  E+ L+ F
Sbjct:  219 VSPEILNTSGSYSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQEILDHPWFSTDFSVSNSGYGAKEVSDQLVPDVNMEENLDPF 341          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: TRIB2_BOVIN (Tribbles homolog 2 OS=Bos taurus GN=TRIB2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    4 VAPEILAKKG-YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLNDSVGCNVGSEKYLNAF 369
            V+PEIL   G Y G   D+WS GV+L+ +  G  PF+D    +++ KI +G++  P+  SP  K  I  +L  +P+ R+T  EIL  PWF  D+      +   +++D +  +V  E+ L+ F
Sbjct:  219 VSPEILNTNGSYSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQEILDHPWFSTDFSVSNSGYGAKEVSDQLVPDVNMEETLDPF 341          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDP----NLMAMYRKIYKGEYRCPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 279
            +APE+L KK YDG   D+WSCGV L+V+  G  PF DP    N     +KI   +Y  P +   SP+ +  I R+   +PA+RIT+ EI   PWF K+
Sbjct:  184 IAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIQKILGVQYSIPDYVHISPECRDLITRIFVGNPASRITMPEIKNHPWFMKN 281          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 279
            +APE+L+++ YDG   D+WSCGV L+V+  G  PF DP+    +RK    I   +Y+ P++   S D +  + R+   +PA RIT+ EI   PWF K+
Sbjct:  166 IAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMKN 263          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 35/94 (37.23%), Postives = 59/94 (62.77%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE 288
            APE+ + K YDG +VD+WS GV+L+ L +G LPF+  NL  +  ++ +G+YR P + S D +  + + L  +P  R ++D I++D W    Y++
Sbjct:  334 APELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMNVGYED 427          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 35/94 (37.23%), Postives = 59/94 (62.77%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE 288
            APE+ + K YDG +VD+WS GV+L+ L +G LPF+  NL  +  ++ +G+YR P + S D +  + + L  +P  R ++D I++D W    Y++
Sbjct:  292 APELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMNVGYED 385          
The following BLAST results are available for this feature:
BLAST of CK934399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
AAPK1_PONAB6.520e-1535.005'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PIG6.520e-1535.005'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN6.520e-1535.005'-AMP-activated protein kinase catalytic subunit ... [more]
TRIB2_PONAB8.515e-1534.15Tribbles homolog 2 OS=Pongo abelii GN=TRIB2 PE=2 S... [more]
TRIB2_CANFA8.515e-1534.15Tribbles homolog 2 OS=Canis familiaris GN=TRIB2 PE... [more]
TRIB2_BOVIN8.515e-1534.15Tribbles homolog 2 OS=Bos taurus GN=TRIB2 PE=2 SV=... [more]
SAPK9_ORYSJ1.112e-1442.86Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
SAPK6_ORYSJ1.112e-1439.80Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
PAR1_CAEEL1.112e-1437.23Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
PAR1_CAEBR1.112e-1437.23Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934399 ID=CK934399; Name=CK934399; organism=Citrus sinensis; type=EST; length=760bp
GGGGTGGCACCGGAGATATTAGCGAAGAAAGGTTACGATGGAGCTAAGGT
GGATATGTGGTCGTGCGGTGTCGTTTTGTTCGTTCTCAACGCAGGTTACT
TGCCGTTCAATGATCCTAATCTCATGGCTATGTACCGGAAGATTTATAAA
GGCGAATACCGGTGCCCGAAATGGACGTCTCCTGATCTGAAATGGTTTAT
TGGCCGGCTTCTCGATACGGATCCCGCTACGAGGATCACCGTTGATGAGA
TTCTCCGTGATCCGTGGTTCAAAAAGGATTATAAAGAGAGGAAGTTTCCT
CACGAGGATTTTGATTTGAATGACTCGGTGGGATGTAACGTCGGGAGTGA
GAAATACTTAAATGCTTTCGATATAATCTCGCTCTCCTCCGGTTTCAATC
TGTCCGGTTTGTTCGACGACTTCAACAACAACGACGCGCCCTTTTGCAAC
GAGCGATTCTTGTCCAATGAAACGCCCGAGAAAATTTTAGAGAAAGTGGA
GGAGGTGGCGCGACTCGTGGCTGATGGCGACAGACTGGCGGTGACAAAGA
AAGAGTGGGGGGCAAAGCTGGAGGGGCAAAATGGGAATTTTACGATGGTT
ATAGGGATTGACCGGTTAACGGATGATCTAGTTGTCGTGGAGATAAAGAA
GAGTATGAGGAGGGGCGAAGAGAACTGGAAAGATAAGCTGAGACCGCTGC
TCGGTGATTTAATTTATCAGCCGGAAGCGACGGTTGCCGGGGTCTCGCAG
TGAGCTGGAC
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