CK934399

Overview
NameCK934399
Unique NameCK934399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: CDR1_SCHPO (Mitosis inducer protein kinase cdr1 OS=Schizosaccharomyces pombe GN=cdr1 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            +APEI++ K Y GA  D+WSCGV+L+ L +  LPF   N   +Y KI  G Y  P   S   +  + R+LD +P+TRIT+ E+   P+
Sbjct:  170 LAPEIVSHKPYRGAPADVWSCGVILYSLLSNKLPFGGQNTDVIYNKIRHGAYDLPSSISSAAQDLLHRMLDVNPSTRITIPEVFSHPF 257          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SRK2F_ARATH (Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana GN=SRK2F PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDP----NLMAMYRKIYKGEYRCPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 276
            VAPE+L++K Y+G   D+WSCGV L+V+  G  PF DP    N+    ++I    Y  P +   S + K  + R+   DP  RITV EI + PWF K
Sbjct:  166 VAPEVLSRKEYNGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSVHYTIPDYVRISSECKHLLSRIFVADPDKRITVPEIEKHPWFLK 262          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 279
            +APE+L++K YDG   D+WSCGV L+V+  G  PF DP+    +RK    I   +Y  P +   S D +  + R+   +P  RIT+ EI   PWF K+
Sbjct:  166 IAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKN 263          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC1D_MOUSE (Calcium/calmodulin-dependent protein kinase type 1D OS=Mus musculus GN=Camk1d PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLNDSVGCNVGSEKYLNAFD 372
            VAPE+LA+K Y  A VD WS GV+ ++L  GY PF D N   ++ +I K EY    P W   S   K FI  L++ DP  R T ++  R PW   D    K  HE   ++  +  N    K+  AF+
Sbjct:  188 VAPEVLAQKPYSKA-VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALSKNIHE--SVSAQIRKNFAKSKWRQAFN 311          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
            APE+   K YDG KVD+WS GVVL+VL  G LPF+   L  +  ++  G++R P + S + +  I  +L  DP  R+++++I R  W K
Sbjct:  172 APELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICRHKWMK 260          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: PLK1_RAT (Serine/threonine-protein kinase PLK1 OS=Rattus norvegicus GN=Plk1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 300
            +APE+L+KKG+   +VD+WS G +++ L  G  PF    L   Y +I K EY  PK  +P     I ++L TDPA R T+ E+L D +F   Y   + P
Sbjct:  218 IAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPAARPTIHELLNDEFFTSGYIPARLP 315          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_RAT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_RABIT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Oryctolagus cuniculus GN=CAMK2D PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_PIG (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Sus scrofa GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
The following BLAST results are available for this feature:
BLAST of CK934399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CDR1_SCHPO9.415e-1442.05Mitosis inducer protein kinase cdr1 OS=Schizosacch... [more]
SRK2F_ARATH1.230e-1341.24Serine/threonine-protein kinase SRK2F OS=Arabidops... [more]
SAPK1_ORYSJ1.230e-1339.80Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
KCC1D_MOUSE1.230e-1337.80Calcium/calmodulin-dependent protein kinase type 1... [more]
SIK3_MOUSE1.606e-1340.45Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]
PLK1_RAT1.606e-1339.39Serine/threonine-protein kinase PLK1 OS=Rattus nor... [more]
KCC2D_RAT1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_RABIT1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_PIG1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_MOUSE1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934399 ID=CK934399; Name=CK934399; organism=Citrus sinensis; type=EST; length=760bp
GGGGTGGCACCGGAGATATTAGCGAAGAAAGGTTACGATGGAGCTAAGGT
GGATATGTGGTCGTGCGGTGTCGTTTTGTTCGTTCTCAACGCAGGTTACT
TGCCGTTCAATGATCCTAATCTCATGGCTATGTACCGGAAGATTTATAAA
GGCGAATACCGGTGCCCGAAATGGACGTCTCCTGATCTGAAATGGTTTAT
TGGCCGGCTTCTCGATACGGATCCCGCTACGAGGATCACCGTTGATGAGA
TTCTCCGTGATCCGTGGTTCAAAAAGGATTATAAAGAGAGGAAGTTTCCT
CACGAGGATTTTGATTTGAATGACTCGGTGGGATGTAACGTCGGGAGTGA
GAAATACTTAAATGCTTTCGATATAATCTCGCTCTCCTCCGGTTTCAATC
TGTCCGGTTTGTTCGACGACTTCAACAACAACGACGCGCCCTTTTGCAAC
GAGCGATTCTTGTCCAATGAAACGCCCGAGAAAATTTTAGAGAAAGTGGA
GGAGGTGGCGCGACTCGTGGCTGATGGCGACAGACTGGCGGTGACAAAGA
AAGAGTGGGGGGCAAAGCTGGAGGGGCAAAATGGGAATTTTACGATGGTT
ATAGGGATTGACCGGTTAACGGATGATCTAGTTGTCGTGGAGATAAAGAA
GAGTATGAGGAGGGGCGAAGAGAACTGGAAAGATAAGCTGAGACCGCTGC
TCGGTGATTTAATTTATCAGCCGGAAGCGACGGTTGCCGGGGTCTCGCAG
TGAGCTGGAC
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