CK934399

Overview
NameCK934399
Unique NameCK934399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Homo sapiens GN=CAMK2D PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_CHICK (Calcium/calmodulin-dependent protein kinase type II delta chain OS=Gallus gallus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2D_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Bos taurus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KC2D1_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 1 chain OS=Danio rerio GN=camk2d1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K+ Y G  VDMW+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT  E L+ PW
Sbjct:  180 LSPEVLRKEPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAAEALKHPW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SIK2_PONAB (Serine/threonine-protein kinase SIK2 OS=Pongo abelii GN=SIK2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 34/87 (39.08%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            APE+   + Y+G ++D+WS GVVL+VL  G LPF+ P L  + +++ +G +R P + S D +  I R+L  DP+ R+T+ +I    W
Sbjct:  184 APEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 34/87 (39.08%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            APE+   + Y+G ++D+WS GVVL+VL  G LPF+ P L  + +++ +G +R P + S D +  I R+L  DP+ R+T+ +I    W
Sbjct:  184 APEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: PLK1_HUMAN (Serine/threonine-protein kinase PLK1 OS=Homo sapiens GN=PLK1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 300
            +APE+L+KKG+   +VD+WS G +++ L  G  PF    L   Y +I K EY  PK  +P     I ++L TDP  R T++E+L D +F   Y   + P
Sbjct:  218 IAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 315          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2G_RAT (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus GN=Camk2g PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT D+ L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2G_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus GN=Camk2g PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT D+ L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2G_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Homo sapiens GN=CAMK2G PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RIT D+ L+ PW
Sbjct:  181 LSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPW 271          
The following BLAST results are available for this feature:
BLAST of CK934399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
KCC2D_HUMAN1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_CHICK1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_BOVIN1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
KC2D1_DANRE1.606e-1342.39Calcium/calmodulin-dependent protein kinase type I... [more]
SIK2_PONAB2.097e-1339.08Serine/threonine-protein kinase SIK2 OS=Pongo abel... [more]
SIK2_HUMAN2.097e-1339.08Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
PLK1_HUMAN2.739e-1338.38Serine/threonine-protein kinase PLK1 OS=Homo sapie... [more]
KCC2G_RAT2.739e-1341.30Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_MOUSE2.739e-1341.30Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_HUMAN2.739e-1341.30Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934399 ID=CK934399; Name=CK934399; organism=Citrus sinensis; type=EST; length=760bp
GGGGTGGCACCGGAGATATTAGCGAAGAAAGGTTACGATGGAGCTAAGGT
GGATATGTGGTCGTGCGGTGTCGTTTTGTTCGTTCTCAACGCAGGTTACT
TGCCGTTCAATGATCCTAATCTCATGGCTATGTACCGGAAGATTTATAAA
GGCGAATACCGGTGCCCGAAATGGACGTCTCCTGATCTGAAATGGTTTAT
TGGCCGGCTTCTCGATACGGATCCCGCTACGAGGATCACCGTTGATGAGA
TTCTCCGTGATCCGTGGTTCAAAAAGGATTATAAAGAGAGGAAGTTTCCT
CACGAGGATTTTGATTTGAATGACTCGGTGGGATGTAACGTCGGGAGTGA
GAAATACTTAAATGCTTTCGATATAATCTCGCTCTCCTCCGGTTTCAATC
TGTCCGGTTTGTTCGACGACTTCAACAACAACGACGCGCCCTTTTGCAAC
GAGCGATTCTTGTCCAATGAAACGCCCGAGAAAATTTTAGAGAAAGTGGA
GGAGGTGGCGCGACTCGTGGCTGATGGCGACAGACTGGCGGTGACAAAGA
AAGAGTGGGGGGCAAAGCTGGAGGGGCAAAATGGGAATTTTACGATGGTT
ATAGGGATTGACCGGTTAACGGATGATCTAGTTGTCGTGGAGATAAAGAA
GAGTATGAGGAGGGGCGAAGAGAACTGGAAAGATAAGCTGAGACCGCTGC
TCGGTGATTTAATTTATCAGCCGGAAGCGACGGTTGCCGGGGTCTCGCAG
TGAGCTGGAC
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