CK934399

Overview
NameCK934399
Unique NameCK934399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KPSH1_HUMAN (Serine/threonine-protein kinase H1 OS=Homo sapiens GN=PSKH1 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPD--LKWFIGRLLDTDPATRITVDEILRDPW 267
            +APE+L +K Y  + VDMW+ GV+ ++L +G +PF D N   +YR+I +G+Y      W S     K FI RLL  DP  R+T  + LR PW
Sbjct:  264 IAPEVLVRKPYTNS-VDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDPGARMTALQALRHPW 354          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KPSH1_BOVIN (Serine/threonine-protein kinase H1 OS=Bos taurus GN=PSKH1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPD--LKWFIGRLLDTDPATRITVDEILRDPW 267
            +APE+L +K Y  + VDMW+ GV+ ++L +G +PF D N   +YR+I +G+Y      W S     K FI RLL  DP  R+T  + LR PW
Sbjct:  264 IAPEVLVRKPYTNS-VDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDPGARMTALQALRHPW 354          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KIN2_YEAST (Serine/threonine-protein kinase KIN2 OS=Saccharomyces cerevisiae GN=KIN2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDY 282
            APE+L  + Y G +VD+WS G+VL+VL  G +PF+D N   ++ KI KG+   P   S ++   + R++  DP  R T+  ++  PW  + Y
Sbjct:  290 APELLKAQPYTGPEVDIWSFGIVLYVLVCGKVPFDDENSSILHEKIKKGKVDYPSHLSIEVISLLTRMIVVDPLRRATLKNVVEHPWMNRGY 381          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2B_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Bos taurus GN=CAMK2B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K+ Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +PA RI   E L+ PW
Sbjct:  181 LSPEVLRKEAY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIMAHEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2A_RAT (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus GN=Camk2a PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +P+ RIT  E L+ PW
Sbjct:  180 LSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2A_PONAB (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Pongo abelii GN=CAMK2A PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +P+ RIT  E L+ PW
Sbjct:  180 LSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2A_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus GN=Camk2a PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +P+ RIT  E L+ PW
Sbjct:  180 LSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2A_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Homo sapiens GN=CAMK2A PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K  Y G  VD+W+CGV+L++L  GY PF D +   +Y++I  G Y    P+W   +P+ K  I ++L  +P+ RIT  E L+ PW
Sbjct:  180 LSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: KCC2A_DROME (Calcium/calmodulin-dependent protein kinase type II alpha chain OS=Drosophila melanogaster GN=CaMKII PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPW 267
            ++PE+L K+ Y G  VD+W+CGV+L++L  GY PF D +   +Y +I  G  +Y  P+W   +P+ K  I ++L  +P  RIT  E L+ PW
Sbjct:  181 LSPEVLKKEPY-GKSVDIWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPW 271          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 276
            +APE+L+++ YDG   D+WSCGV L+V+  G  PF DP+    +RK    I   +Y  P +   S D    + R+   +P  RIT+ EI   PWF K
Sbjct:  156 IAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYSVPDYVRVSMDCIHLLSRIFVGNPQQRITIPEIKNHPWFLK 252          
The following BLAST results are available for this feature:
BLAST of CK934399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
KPSH1_HUMAN7.970e-1342.39Serine/threonine-protein kinase H1 OS=Homo sapiens... [more]
KPSH1_BOVIN7.970e-1342.39Serine/threonine-protein kinase H1 OS=Bos taurus G... [more]
KIN2_YEAST7.970e-1336.96Serine/threonine-protein kinase KIN2 OS=Saccharomy... [more]
KCC2B_BOVIN1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_RAT1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_PONAB1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_MOUSE1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_HUMAN1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_DROME1.359e-1240.22Calcium/calmodulin-dependent protein kinase type I... [more]
AAIP_WHEAT1.359e-1239.18Abscisic acid-inducible protein kinase (Fragment) ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934399 ID=CK934399; Name=CK934399; organism=Citrus sinensis; type=EST; length=760bp
GGGGTGGCACCGGAGATATTAGCGAAGAAAGGTTACGATGGAGCTAAGGT
GGATATGTGGTCGTGCGGTGTCGTTTTGTTCGTTCTCAACGCAGGTTACT
TGCCGTTCAATGATCCTAATCTCATGGCTATGTACCGGAAGATTTATAAA
GGCGAATACCGGTGCCCGAAATGGACGTCTCCTGATCTGAAATGGTTTAT
TGGCCGGCTTCTCGATACGGATCCCGCTACGAGGATCACCGTTGATGAGA
TTCTCCGTGATCCGTGGTTCAAAAAGGATTATAAAGAGAGGAAGTTTCCT
CACGAGGATTTTGATTTGAATGACTCGGTGGGATGTAACGTCGGGAGTGA
GAAATACTTAAATGCTTTCGATATAATCTCGCTCTCCTCCGGTTTCAATC
TGTCCGGTTTGTTCGACGACTTCAACAACAACGACGCGCCCTTTTGCAAC
GAGCGATTCTTGTCCAATGAAACGCCCGAGAAAATTTTAGAGAAAGTGGA
GGAGGTGGCGCGACTCGTGGCTGATGGCGACAGACTGGCGGTGACAAAGA
AAGAGTGGGGGGCAAAGCTGGAGGGGCAAAATGGGAATTTTACGATGGTT
ATAGGGATTGACCGGTTAACGGATGATCTAGTTGTCGTGGAGATAAAGAA
GAGTATGAGGAGGGGCGAAGAGAACTGGAAAGATAAGCTGAGACCGCTGC
TCGGTGATTTAATTTATCAGCCGGAAGCGACGGTTGCCGGGGTCTCGCAG
TGAGCTGGAC
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