CK934399

Overview
NameCK934399
Unique NameCK934399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE---RKFPHEDFDLND 324
            APE+   K YDG +VD+WS GV+L+ L +G LPF+  NL  +  ++ +G+YR P + S D +  + R L  +P  R T+++I++D W    ++E   + F   + D++D
Sbjct:  220 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEEELKPFVEPELDISD 328          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE---RKFPHEDFDLND 324
            APE+   K YDG +VD+WS GV+L+ L +G LPF+  NL  +  ++ +G+YR P + S D +  + R L  +P  R T+++I++D W    ++E   + F   + D++D
Sbjct:  220 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 328          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 32/87 (36.78%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   10 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWF 270
            PE++  + YDG + DMWSCGV+LF L  G LPF+D NL  +  K+ +G +  P +  PD +  +  +++ +P  R+++++I + PW+
Sbjct:  199 PEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWY 285          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 32/87 (36.78%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   10 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWF 270
            PE++  + YDG + DMWSCGV+LF L  G LPF+D NL  +  K+ +G +  P +  PD +  +  +++ +P  R+++++I + PW+
Sbjct:  215 PEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWY 301          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15
Identity = 38/91 (41.76%), Postives = 59/91 (64.84%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 279
            APE+   K Y+G ++D+WS GVVL+VL  G LPF+ PNL  + +++ +G +R P + S D +  I R+L  DPA RIT+ +I +  W + +
Sbjct:  191 APEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLVVDPARRITIAQIRQHRWMRAE 281          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15
Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE---RKFPHEDFDLND 324
            APE+   K YDG +VD+WS GV+L+ L +G LPF+  NL  +  ++ +G+YR P + S D +  + R L  +P  R T+++I++D W    ++E   + F   + D++D
Sbjct:  243 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 351          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15
Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE-DFDLN 321
            APE+++ + Y G +VD+WSCGV+L+ L  G LPF+D ++  +++KI  G +  P++ +  +   +  +L  DP  R T+ +I    WFK+D     FP +  +D N
Sbjct:  181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSIATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDAN 286          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: SRK2D_ARATH (Serine/threonine-protein kinase SRK2D OS=Arabidopsis thaliana GN=SRK2D PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    4 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPK--WTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 279
            +APEIL ++ YDG   D+WSCGV L+V+  G  PF DP     YRK    I    Y  P+    SP+ +  I R+   DPATRIT+ EI  D WF K+
Sbjct:  185 IAPEILLRQEYDGKLADVWSCGVTLYVMLVGAYPFEDPQEPRDYRKTIQRILSVTYSIPEDLHLSPECRHLISRIFVADPATRITIPEITSDKWFLKN 282          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
            APE+++ K Y G +VD+WSCGV+L+      LPF+D ++  +++KI +G +  P + SP     I ++L  DP  RIT+ EI   PWF+
Sbjct:  197 APEVISGKLYAGPEVDVWSCGVILYAFLCAKLPFDDESIPMLFKKIREGVFSIPDFVSPSCADLIKKMLVVDPVKRITIHEIRNHPWFQ 285          
BLAST of CK934399 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    7 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE-DFDLN 321
            APE+++ + Y G +VD+WSCGV+L+ L  G LPF+D ++  +++KI  G +  P++ +  +   +  +L  DP  R T+ +I    WFK+D     FP +  +D N
Sbjct:  181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDAN 286          
The following BLAST results are available for this feature:
BLAST of CK934399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
MARK3_RAT1.314e-1535.78MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE1.314e-1535.78MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
BRSK1_MOUSE1.314e-1536.78BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN1.314e-1536.78BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
SIK1_HUMAN1.716e-1541.76Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
MARK3_HUMAN1.716e-1535.78MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
AAPK2_RAT1.716e-1534.915'-AMP-activated protein kinase catalytic subunit ... [more]
SRK2D_ARATH2.241e-1544.90Serine/threonine-protein kinase SRK2D OS=Arabidops... [more]
AMPKA_DICDI2.241e-1540.455'-AMP-activated serine/threonine-protein kinase c... [more]
AAPK2_PONAB2.241e-1534.915'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934399 ID=CK934399; Name=CK934399; organism=Citrus sinensis; type=EST; length=760bp
GGGGTGGCACCGGAGATATTAGCGAAGAAAGGTTACGATGGAGCTAAGGT
GGATATGTGGTCGTGCGGTGTCGTTTTGTTCGTTCTCAACGCAGGTTACT
TGCCGTTCAATGATCCTAATCTCATGGCTATGTACCGGAAGATTTATAAA
GGCGAATACCGGTGCCCGAAATGGACGTCTCCTGATCTGAAATGGTTTAT
TGGCCGGCTTCTCGATACGGATCCCGCTACGAGGATCACCGTTGATGAGA
TTCTCCGTGATCCGTGGTTCAAAAAGGATTATAAAGAGAGGAAGTTTCCT
CACGAGGATTTTGATTTGAATGACTCGGTGGGATGTAACGTCGGGAGTGA
GAAATACTTAAATGCTTTCGATATAATCTCGCTCTCCTCCGGTTTCAATC
TGTCCGGTTTGTTCGACGACTTCAACAACAACGACGCGCCCTTTTGCAAC
GAGCGATTCTTGTCCAATGAAACGCCCGAGAAAATTTTAGAGAAAGTGGA
GGAGGTGGCGCGACTCGTGGCTGATGGCGACAGACTGGCGGTGACAAAGA
AAGAGTGGGGGGCAAAGCTGGAGGGGCAAAATGGGAATTTTACGATGGTT
ATAGGGATTGACCGGTTAACGGATGATCTAGTTGTCGTGGAGATAAAGAA
GAGTATGAGGAGGGGCGAAGAGAACTGGAAAGATAAGCTGAGACCGCTGC
TCGGTGATTTAATTTATCAGCCGGAAGCGACGGTTGCCGGGGTCTCGCAG
TGAGCTGGAC
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