CK934401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 58/137 (42.34%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P +++ I +VI++G +E R A + V LYPGG FDPLGLA DP L++ E+K+ RLAM + F +QA Sbjct: 99 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 235
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 71/210 (33.81%), Postives = 90/210 (42.86%), Query Frame = 1 Query: 238 PPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 PP +L G GD G+D GL E AKN RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ E+K RLAM++ F +QA Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQA 231
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15 Identity = 64/159 (40.25%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 391 DSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 D+ EL P E F + RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 82 DTAELSADP-----ETFA--KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15 Identity = 75/230 (32.61%), Postives = 99/230 (43.04%), Query Frame = 1 Query: 193 PTRDSDRLVWFP--GATPPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALT--GVAWQDAG------KVELVEGSSYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 P SDR+++ PP +L G GD G+D GL E AKN RE E+IH RWAMLG LG + E L GV + +AG ++ G YLG P +L+ I +V+++G +E R A +DP LYPGG FDPLGLA P L++ EIK+ RLAM + F +QA Sbjct: 49 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15 Identity = 59/137 (43.07%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +VI++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15 Identity = 59/137 (43.07%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +VI++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233 The following BLAST results are available for this feature:
BLAST of CK934401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934401 ID=CK934401; Name=CK934401; organism=Citrus sinensis; type=EST; length=832bpback to top |