CK934412

Overview
NameCK934412
Unique NameCK934412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: NENF_HUMAN (Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 1
Query:   55 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYK-FMSKYVKVGSIKSTVPVTDGA 393
            PPV+L   TEEEL +Y G +  +P+ +A+K  ++DV+  + FYG G PY    GKD++R +AKMS +  DLT D +GL   ELEAL +   K + +KY  VG     +   DG+
Sbjct:   42 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAKELEALDEVFTKVYKAKYPIVGYTARRILNEDGS 153          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC1_PONAB (Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 GHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            G     S + ++   P  P ++  + T  EL+++DG    + +LMAI  +++DV+  R FYGP GPY +FAG+DASR LA    ++   KD   D+S L   + E L DWE +F  KY  VG +
Sbjct:   48 GDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKL 170          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC1_HUMAN (Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 GHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            G     S + ++   P  P ++  + T  EL+++DG    + +LMAI  +++DV+  R FYGP GPY +FAG+DASR LA    ++   KD   D+S L   + E L DWE +F  KY  VG +
Sbjct:   48 GDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKL 170          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC2_HUMAN (Membrane-associated progesterone receptor component 2 OS=Homo sapiens GN=PGRMC2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 42/114 (36.84%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   31 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            EE      P ++  + + E+L+QYDGS + + +L+A+  +++DV+    FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++WE +F  KY  VG +
Sbjct:   88 EESPATSLPRMKKRDFSLEQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRL 200          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC2_RAT (Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus GN=Pgrmc2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   31 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            EE      P ++  + + E+L+QYDG+ + + +L+A+  +++DV+    FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++WE +F  KY  VG +
Sbjct:   82 EESPAATLPRMKKRDFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRL 194          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC2_MOUSE (Membrane-associated progesterone receptor component 2 OS=Mus musculus GN=Pgrmc2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   31 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            EE      P ++  + + E+L+QYDG+ + + +L+A+  +++DV+    FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++WE +F  KY  VG +
Sbjct:   82 EESPAATLPRMKKRDFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRL 194          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: PGRC1_CHICK (Membrane-associated progesterone receptor component 1 OS=Gallus gallus GN=PGRMC1 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   52 PPPV---QLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            PPP+   +  + T E+L+ YDG    + +LMA+  +++DV+ +  FYGP GPY +FAG+DASR LA    ++   +D   D+S L   + E L+DWE +F  KY  VG +
Sbjct:   60 PPPLPKMKRRDFTLEQLRPYDGVRDPR-ILMAVNGKVFDVTRASKFYGPDGPYGIFAGRDASRGLATFCLDKEALRDDYDDLSDLNATQQETLRDWESQFTFKYHHVGKL 168          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: CB5D2_XENTR (Cytochrome b5 domain-containing protein 2 OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 49/148 (33.11%), Postives = 72/148 (48.65%), Query Frame = 1
Query:   52 PPPVQLGE---ITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKEGVVDTPAESKGVVDTPAETKE 486
            P   +L E   +++EEL  YDG      + +AI  Q++DV      YGPGG Y+ FAGKDASRA     F EK L  D++ L P ++  L +W   +   Y+ +G +        G    ES  P + + D    +  V+D   + KE
Sbjct:   36 PQQCELSEGRLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGLVDDVTELSPLQMLHLHNWLSFYQQNYITIGKL-------TGRFYDESGNPTKALED----ALKVIDIGLKLKE 172          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: DAP1_SCHPO (Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe GN=dap1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 1
Query:   10 QQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEEK-------DLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTE 414
            ++  + +    EP  P  +  + T  ELK+Y+GS +   + +AIK  +Y+V+    FYGP GPY+ FAG DASR LAK SF+++       +   D S L   E +AL DW+  F  KY  VG + S       A+  E+ E
Sbjct:   23 RKNEKSFIASEEPKQP--EWRDYTPAELKEYNGSKNSL-VFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLISPREARAAATISETEE 161          
BLAST of CK934412 vs. ExPASy Swiss-Prot
Match: CB5D2_DANRE (Cytochrome b5 domain-containing protein 2 OS=Danio rerio GN=cyb5d2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 1
Query:   76 ITEEELKQYDGSDSKKPLLMAIKSQIYDVSHSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 363
            +T+E+L  Y+G  + K L +AI  Q++DV   R  YGPGG Y  F GKDASRA     F E  L+ D+S     ++ AL DW   +   Y  VG +
Sbjct:   54 LTKEQLSLYNGGKNSKGLYLAILGQVFDVEKGRKHYGPGGGYHFFTGKDASRAFITGDFTEAGLSNDVSDFSESQIVALYDWLSFYQRDYTPVGKL 149          
The following BLAST results are available for this feature:
BLAST of CK934412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
NENF_HUMAN5.888e-1742.11Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1[more]
PGRC1_PONAB1.312e-1637.90Membrane-associated progesterone receptor componen... [more]
PGRC1_HUMAN1.312e-1637.90Membrane-associated progesterone receptor componen... [more]
PGRC2_HUMAN2.237e-1636.84Membrane-associated progesterone receptor componen... [more]
PGRC2_RAT3.817e-1635.96Membrane-associated progesterone receptor componen... [more]
PGRC2_MOUSE3.817e-1635.96Membrane-associated progesterone receptor componen... [more]
PGRC1_CHICK8.502e-1640.00Membrane-associated progesterone receptor componen... [more]
CB5D2_XENTR3.231e-1533.11Cytochrome b5 domain-containing protein 2 OS=Xenop... [more]
DAP1_SCHPO5.511e-1535.92Cytochrome P450 regulator dap1 OS=Schizosaccharomy... [more]
CB5D2_DANRE9.400e-1540.63Cytochrome b5 domain-containing protein 2 OS=Danio... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_E05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934412 ID=CK934412; Name=CK934412; organism=Citrus sinensis; type=EST; length=692bp
GGGCATCATCAGCAGAGATCGAGGGAGTACGAGGAACAGATGGAGCCTCT
GCCACCGCCTGTTCAGCTAGGCGAGATTACCGAGGAGGAGCTCAAACAGT
ACGATGGCTCCGATTCCAAAAAGCCCCTTCTCATGGCCATCAAGAGCCAG
ATCTACGATGTCTCTCACAGCAGGATGTTTTATGGACCTGGTGGGCCATA
TGCGTTGTTTGCTGGAAAGGATGCTAGCAGGGCCCTTGCCAAGATGTCTT
TTGAGGAAAAAGATTTAACTGGTGATATCTCTGGTCTTGGTCCATTTGAG
TTGGAGGCATTGCAGGACTGGGAGTATAAGTTCATGAGCAAGTATGTTAA
GGTTGGATCTATCAAGTCGACAGTTCCAGTAACAGATGGAGCCTCCTCTG
GTGAATCCACTGAGCCTAAAGAAGGAGTTGTTGATACACCTGCAGAAAGT
AAAGGAGTTGTTGATACACCTGCAGAAACTAAAGAAGTAGATATCGCTAA
GCCTGCTGAATATGGTCCGTCAGAGACTGCAGCCGCTGGACCTGAGGCAA
CCCNNNNNTCTGATGATACTAAGAAGGAGTAAGCCGAACCCCATCTGTTG
ATGATGCTGAGGAGTAGAATTTAATCATAAGGCAAACCCCATCTGTTTGG
CTGCGTGTATTNNNGAATTTTTTCACATATTAGTAAGTTTAC
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