CK934431

Overview
NameCK934431
Unique NameCK934431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934431 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  218 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 529
            S +F RA ++EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA+FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CK934431 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  218 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 529
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQAMPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CK934431 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 67/235 (28.51%), Postives = 106/235 (45.11%), Query Frame = 2
Query:  173 KEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGHSL 874
            K  PP PL +          + G AEF  TF  ++ TVL+ + + + +    +  + GIA + G  +  LV     ISG H+NPAV+  + +   L     + Y+  Q LG+I  +  VKG      Y  +  G   V    T  +    E + TFVL++ + + ATD       + V  L  + +G  + +  L   P TG  +NPAR+LG AI   +   +   W++ V   L
Sbjct:   86 KIKPPVPLVK----------KVG-AEFFGTFTLIF-TVLSTIIMDEQHKGVES--LLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGM-----YHPVNPGIVTVPKVGTV-EAFFLEFVTTFVLLFIITALATD------PNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGR---YTQIWVYLVATPL 291          
BLAST of CK934431 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  218 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 529
            S +F RA  +EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAIL 99          
The following BLAST results are available for this feature:
BLAST of CK934431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
AQP2_PROHA7.457e-1139.42Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_HORSE7.457e-1139.42Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
NIP32_ORYSJ9.739e-1128.51Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
AQP2_DUGDU9.739e-1139.42Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934431 ID=CK934431; Name=CK934431; organism=Citrus sinensis; type=EST; length=900bp
GGGGACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAATAA
GAGAGCGAGAGAGAGGTTCATCATCGTCAATGGAAGGCAAAGAAGAGGAT
GTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATC
AGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTG
AGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAG
TTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGG
TGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTG
CTTGGGCCTTTGGTGGCATGATCTTTGCCCTTGTTTACTGCACTGCTGGT
ATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGC
GAGGAAGCTTTCCCTGACAAGAGCTGTCTTCTACATGGTCATGCAGTGCC
TTGGTGCCATCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAG
AACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACAC
CAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTT
ACACTGTCTTCTCTGCCACTGATGCCAAGAGAAACGCCAGAGATTCTCAT
GTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCCA
CCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGTC
TTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTGG
ATCTTCTGGGTTGGACATTCATTGGAGCTGCACTGGCTGCTGTGTACCAC
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